The impact of insertion sequences on bacterial genome plasticity and adaptability

J Vandecraen, M Chandler, A Aertsen… - Critical reviews in …, 2017 - Taylor & Francis
Transposable elements (TE), small mobile genetic elements unable to exist independently
of the host genome, were initially believed to be exclusively deleterious genomic parasites …

Small RNAs in bacteria and archaea: who they are, what they do, and how they do it

EGH Wagner, P Romby - Advances in genetics, 2015 - Elsevier
Small RNAs are ubiquitously present regulators in all kingdoms of life. Most bacterial and
archaeal small RNAs (sRNAs) act by antisense mechanisms on multiple target mRNAs …

Hfq: the flexible RNA matchmaker

TB Updegrove, A Zhang, G Storz - Current opinion in microbiology, 2016 - Elsevier
Highlights•Hfq contacts RNA via proximal, distal, rim and C-terminal surfaces.•RNAs interact
with Hfq in multiple ways.•Mechanisms of Hfq-facilitated RNA pairing are being elucidated …

Regulation of bacterial virulence by Csr (Rsm) systems

CA Vakulskas, AH Potts, P Babitzke… - Microbiology and …, 2015 - Am Soc Microbiol
Most bacterial pathogens have the remarkable ability to flourish in the external environment
and in specialized host niches. This ability requires their metabolism, physiology, and …

Hfq chaperone brings speed dating to bacterial sRNA

A Santiago‐Frangos… - Wiley Interdisciplinary …, 2018 - Wiley Online Library
Hfq is a ubiquitous, Sm‐like RNA binding protein found in most bacteria and some archaea.
Hfq binds small regulatory RNAs (sRNAs), facilitates base pairing between sRNAs and their …

[HTML][HTML] A 3′ external transcribed spacer in a tRNA transcript acts as a sponge for small RNAs to prevent transcriptional noise

D Lalaouna, MC Carrier, S Semsey, JS Brouard… - Molecular cell, 2015 - cell.com
During ribosomal and transfer RNA maturation, external transcribed spacer (ETS) and
internal transcribed spacer (ITS) sequences are excised and, as non-functional by-products …

Alternative Hfq‐sRNA interaction modes dictate alternative mRNA recognition

DJ Schu, A Zhang, S Gottesman, G Storz - The EMBO journal, 2015 - embopress.org
Many bacteria use small RNA s (sRNA s) and the RNA chaperone Hfq to regulate mRNA
stability and translation. Hfq, a ring‐shaped homohexamer, has multiple faces that can bind …

Cross talk between ABC transporter m RNA s via a target m RNA‐derived sponge of the G cv B small RNA

M Miyakoshi, Y Chao, J Vogel - The EMBO journal, 2015 - embopress.org
There is an expanding list of examples by which one mRNA can posttranscriptionally
influence the expression of others. This can involve RNA sponges that sequester regulatory …

Molecular mechanism of mRNA repression in trans by a ProQ‐dependent small RNA

A Smirnov, C Wang, LL Drewry, J Vogel - The EMBO journal, 2017 - embopress.org
Research into post‐transcriptional control of mRNAs by small noncoding RNAs (sRNAs) in
the model bacteria Escherichia coli and Salmonella enterica has mainly focused on sRNAs …

RNA-binding proteins involved in post-transcriptional regulation in bacteria

E Van Assche, S Van Puyvelde… - Frontiers in …, 2015 - frontiersin.org
Post-transcriptional regulation is a very important mechanism to control gene expression in
changing environments. In the past decade, a lot of interest has been directed toward the …