Overcoming the pitfalls of merging dietary metabarcoding into ecological networks

JP Cuff, FM Windsor, MPTG Tercel… - Methods in Ecology …, 2022 - Wiley Online Library
The construction of increasingly detailed species interaction networks is extending the
potential applications of network ecology, providing an opportunity to understand complex …

The predator problem and PCR primers in molecular dietary analysis: swamped or silenced; depth or breadth?

JP Cuff, JJN Kitson… - Molecular Ecology …, 2023 - Wiley Online Library
Dietary metabarcoding has vastly improved our ability to analyse the diets of animals, but it
is hampered by a plethora of technical limitations including potentially reduced data output …

An assessment of minimum sequence copy thresholds for identifying and reducing the prevalence of artefacts in dietary metabarcoding data

LE Drake, JP Cuff, RE Young… - Methods in Ecology …, 2022 - Wiley Online Library
Metabarcoding provides a powerful tool for investigating biodiversity and trophic
interactions, but the high sensitivity of this methodology makes it vulnerable to errors …

The problem of omnivory: A synthesis on omnivory and DNA metabarcoding

MPTG Tercel, WOC Symondson, JP Cuff - 2021 - Wiley Online Library
Dietary analysis using DNA metabarcoding is a powerful tool that is increasingly being used
to further our knowledge of trophic interactions in highly complex food webs but is not …

Successes and limitations of quantitative diet metabarcoding in a small, herbivorous mammal

TE Stapleton, SB Weinstein… - Molecular Ecology …, 2022 - Wiley Online Library
DNA metabarcoding is widely used to determine wild animal diets, but whether this
technique provides accurate, quantitative measurements is still under debate. To test our …

Money spider dietary choice in pre‐and post‐harvest cereal crops using metabarcoding

JP Cuff, LE Drake, MPTG Tercel… - Ecological …, 2021 - Wiley Online Library
Money spiders (Linyphiidae) are an important component of conservation biological control
in cereal crops, but they rely on alternative prey when pests are not abundant, such as …

[HTML][HTML] More intraguild prey than pest species in arachnid diets may compromise biological control in apple orchards

PA Hambäck, AR Cirtwill, D García… - Basic and Applied …, 2021 - Elsevier
Understanding the full diet of natural enemies is necessary for evaluating their role as
biocontrol agents, because many enemy species do not only feed on pests but also on other …

The bug in a teacup—monitoring arthropod–plant associations with environmental DNA from dried plant material

H Krehenwinkel, S Weber, S Künzel… - Biology …, 2022 - royalsocietypublishing.org
Environmental DNA analysis (eDNA) has revolutionized the field of biomonitoring in the past
years. Various sources have been shown to contain eDNA of diverse organisms, for …

[PDF][PDF]  Abundance estimation with DNA metabarcoding–recent advancements for terrestrial arthropods

W Sickel, V Zizka, A Scherges… - Metabarcoding and …, 2023 - mbmg.pensoft.net
Biodiversity is declining at alarming rates worldwide and large-scale monitoring is urgently
needed to understand changes and their drivers. While classical taxonomic identification of …

A roadmap for biomonitoring in the 21st century: merging methods into metrics via ecological networks

JP Cuff, MD Suresh, MEG Dopson… - Advances in ecological …, 2023 - Elsevier
The urgent need for highly resolved and broad biomonitoring has never been greater as
challenges such as climate change, agricultural intensification and biodiversity loss …