Decoding the impact of nuclear organization on antigenic variation in parasites

A Barcons-Simon, M Carrington, TN Siegel - Nature Microbiology, 2023 - nature.com
Antigenic variation as a strategy to evade the host adaptive immune response has evolved
in divergent pathogens. Antigenic variation involves restricted, and often mutually exclusive …

Trans-splicing of nematode premessenger RNA

TW Nilsen - Annual review of microbiology, 1993 - go.gale.com
The common 5'terminal 22-nt sequence in mRNAs essential for gene expression of
nematodes is formed by trans-splicing of spliced leader RNAs. This process is similar to cis …

Evidence for trans splicing in trypanosomes

RE Sutton, JC Boothroyd - Cell, 1986 - cell.com
The 5'ends of trypanosome mRNAs consist of an identical sequence of 35 nucleotides. This
“mini-exon” sequence is derived from the 5'end of a 137 nucleotide RNA (medRNA). The …

A trans-spliced leader sequence on actin mRNA in C. elegans

M Krause, D Hirsh - Cell, 1987 - Elsevier
While determining the 5′ ends of C. elegans actin mRNAs, we have discovered a 22
nucleotide spliced leader sequence. The leader sequence is found on mRNA from three of …

Identification of a novel Y branch structure as an intermediate in trypanosome mRNA processing: evidence for trans splicing

WJ Murphy, KP Watkins, N Agabian - Cell, 1986 - cell.com
Results A 100 Nucleotide Fragment of the SL RNA Is Associated with High Molecular Weight
RNA Throughout this manuscript we will consider the 135 nucleotide SL RNA as having two …

[HTML][HTML] Glucosylated hydroxymethyluracil, DNA base J, prevents transcriptional readthrough in Leishmania

HGAM van Luenen, C Farris, S Jan, PA Genest… - Cell, 2012 - cell.com
Some Ts in nuclear DNA of trypanosomes and Leishmania are hydroxylated and
glucosylated to yield base J (β-D-glucosyl-hydroxymethyluracil). In Leishmania, about 99 …

Antigenic variation in Trypanosoma brucei analyzed by electrophoretic separation of chromosome-sized DNA molecules

LHT Van der Ploeg, DC Schwartz, CR Cantor, P Borst - Cell, 1984 - cell.com
Pulsed field gradient gel electrophoresis fractionates chromosome-sized DNA molecules
from T. brucei. About 60% of the DNA remains in or close to the gel slot (large DNA). There …

Trypanosome mRNAs have unusual" cap 4" structures acquired by addition of a spliced leader.

KL Perry, KP Watkins… - Proceedings of the …, 1987 - National Acad Sciences
A single capped oligonucleotide is released from Trypanosoma brucei poly (A)+ RNA upon
digestion with RNase T2. This observation supports the hypothesis that all T. brucei mRNAs …

Knockout of protein phosphatase 1 in Leishmania major reveals its role during RNA polymerase II transcription termination

R Kieft, Y Zhang, H Yan, RJ Schmitz… - Nucleic Acids …, 2023 - academic.oup.com
The genomes of kinetoplastids are organized into polycistronic transcription units that are
flanked by a modified DNA base (base J, beta-D-glucosyl-hydroxymethyluracil). Previous …

α-Amanitin-insensitive transcription of variant surface glycoprotein genes provides further evidence for discontinuous transcription in trypanosomes

JM Kooter, P Borst - Nucleic acids research, 1984 - academic.oup.com
Many, if not all, mRNAs in T. brucei start with the same sequence of 35 nucleotides,
separately encoded in clustered so-called mini-exon repeats. From these mini-axon repeats …