GPGPU computing for microscopic simulations of crowd dynamics

J Wąs, H Mróz, P Topa - Computing and Informatics, 2015 - cai.sk
We compare GPGPU implementations of two popular models of crowd dynamics.
Specifically, we consider a continuous social force model, based on differential equations …

Efficient model of tumor dynamics simulated in multi-GPU environment

A Kłusek, M Łoś, M Paszyński… - … International Journal of …, 2019 - journals.sagepub.com
The application of computer simulation as a tool in predicting cancer dynamics (eg during
anticancer therapy) requires tumor models, which are nontrivial and, simultaneously, not …

PAM: particle automata in modeling of multiscale biological systems

W Dzwinel, R Wcisło, DA Yuen, S Miller - ACM Transactions on …, 2016 - dl.acm.org
Serious problems with bridging multiple scales in the scope of a single numerical model
make computer simulations too demanding computationally and highly unreliable. We …

Continuous and discrete models of melanoma progression simulated in multi-GPU environment

W Dzwinel, A Kłusek, R Wcisło, M Panuszewska… - Parallel Processing and …, 2018 - Springer
Existing computational models of cancer evolution mostly represent very general
approaches for studying tumor dynamics in a homogeneous tissue. Here we present two …

PAM: Particle automata model in simulation of Fusarium graminearum pathogen expansion

R Wcisło, SS Miller, W Dzwinel - Journal of Theoretical Biology, 2016 - Elsevier
The multi-scale nature and inherent complexity of biological systems are a great challenge
for computer modeling and classical modeling paradigms. We present a novel particle …

A Metaphor of Complex Automata in Modeling Biological Phenomena

R Wcisło, W Dzwinel - … 10th International Conference on Cellular Automata …, 2012 - Springer
We demonstrate that Complex automata (CxA)-a hybrid of a Particle method (PM) and
Cellular automata (CA)—can serve as a convenient modeling framework in developing …

[PDF][PDF] 3D Visualisation of Tumour-Induced Angiogenesis Using the CUDA Programming Model and OpenGL Interoperability

PM Darbyshire - Journal of Cancer Treatment and Research, 2015 - academia.edu
In this paper we solve a complex discrete-continuous model of tumour-induced
angiogenesis using an explicit time-stepping FDM and simultaneously simulate the model …

[PDF][PDF] Efficient model of tumor progression simulated in multi-GPU environment

W Dzwinel, A Kłusek, M Łos, M Paszynski - researchgate.net
The application of computer simulation as a tool in predicting cancer dynamics (eg, during
anti-cancer therapy) requires tumor models, which are non-trivial and, simultaneously, not …