Eukaryotic circular rep-encoding single-stranded DNA (CRESS DNA) viruses: ubiquitous viruses with small genomes and a diverse host range

L Zhao, K Rosario, M Breitbart, S Duffy - Advances in virus research, 2019 - Elsevier
While single-stranded DNA (ssDNA) was once thought to be a relatively rare genomic
architecture for viruses, modern metagenomics sequencing has revealed circular ssDNA …

[HTML][HTML] Novel virus identification through metagenomics: a systematic review

C Bassi, P Guerriero, M Pierantoni, E Callegari… - Life, 2022 - mdpi.com
Metagenomic Next Generation Sequencing (mNGS) allows the evaluation of complex
microbial communities, avoiding isolation and cultivation of each microbial species, and …

[HTML][HTML] Taxonomic update for mammalian anelloviruses (family Anelloviridae)

A Varsani, T Opriessnig, V Celer, F Maggi… - Archives of …, 2021 - Springer
Anelloviruses are small negative-sense single-stranded DNA viruses with genomes ranging
in size from 1.6 to 3.9 kb. The family Anelloviridae comprised 14 genera before the present …

[HTML][HTML] Virome in the cloaca of wild and breeding birds revealed a diversity of significant viruses

T Shan, S Yang, H Wang, H Wang, J Zhang, G Gong… - Microbiome, 2022 - Springer
Background Wild birds may harbor and transmit viruses that are potentially pathogenic to
humans, domestic animals, and other wildlife. Results Using the viral metagenomic …

[HTML][HTML] Family Genomoviridae: 2021 taxonomy update

A Varsani, M Krupovic - Archives of virology, 2021 - Springer
Abstract The family Genomoviridae (phylum Cressdnaviricota, class Repensiviricetes, order
Geplafuvirales) includes viruses with circular single-stranded DNA genomes encoding two …

Viral metagenomics unveiled extensive communications of viruses within giant pandas and their associated organisms in the same ecosystem

M Zhao, C Yue, Z Yang, Y Li, D Zhang, J Zhang… - Science of the Total …, 2022 - Elsevier
Cross-species transmission events were commonplace, with numerous cases of host-
switching during the viral evolutionary history, but relatively little evidence for onward …

Evolution of anelloviruses from a circovirus-like ancestor through gradual augmentation of the jelly-roll capsid protein

A Butkovic, S Kraberger, Z Smeele, DP Martin… - Virus …, 2023 - academic.oup.com
Anelloviruses are highly prevalent in diverse mammals, including humans, but so far have
not been linked to any disease and are considered to be part of the 'healthy virome'. These …

[HTML][HTML] Faecal virome analysis of wild animals from Brazil

M A. Duarte, JM F. Silva, C R. Brito, D S. Teixeira… - Viruses, 2019 - mdpi.com
The Brazilian Cerrado fauna shows very wide diversity and can be a potential viral reservoir.
Therefore, the animal's susceptibility to some virus can serve as early warning signs of …

[HTML][HTML] Complex virome in feces from Amerindian children in isolated Amazonian villages

JD Siqueira, MG Dominguez-Bello, M Contreras… - Nature …, 2018 - nature.com
The number of viruses circulating in small isolated human populations may be reduced by
viral extinctions and rare introductions. Here we used viral metagenomics to characterize the …

[HTML][HTML] Expanding known viral diversity in plants: virome of 161 species alongside an ancient canal

S Yang, Q Mao, Y Wang, J He, J Yang, X Chen… - Environmental …, 2022 - Springer
Background Since viral metagenomic approach was applied to discover plant viruses for the
first time in 2006, many plant viruses had been identified from cultivated and non-cultivated …