[HTML][HTML] Analysis of meristems and plant regeneration at single-cell resolution

RY Liao, JW Wang - Current opinion in plant biology, 2023 - Elsevier
Rapid development of high-throughput single-cell RNA sequencing (scRNA-seq)
technologies offers exciting opportunities to reveal new and rare cell types, previously …

Resolving plant development in space and time with single-cell genomics

TM Nolan, R Shahan - Current opinion in plant biology, 2023 - Elsevier
Single-cell genomics technologies are ushering in a new research era. In this review, we
summarize the benefits and current challenges of using these technologies to probe the …

Single‐cell RNA‐seq reveals fate determination control of an individual fibre cell initiation in cotton (Gossypium hirsutum)

Y Qin, M Sun, W Li, M Xu, L Shao, Y Liu… - Plant Biotechnology …, 2022 - Wiley Online Library
Cotton fibre is a unicellular seed trichome, and lint fibre initials per seed as a factor
determines fibre yield. However, the mechanisms controlling fibre initiation from ovule …

[HTML][HTML] A maize epimerase modulates cell wall synthesis and glycosylation during stomatal morphogenesis

Y Zhou, T Zhang, X Wang, W Wu, J Xing, Z Li… - Nature …, 2023 - nature.com
The unique dumbbell-shape of grass guard cells (GCs) is controlled by their cell walls which
enable their rapid responses to the environment. The molecular mechanisms regulating the …

Best practices for the execution, analysis, and data storage of plant single-cell/nucleus transcriptomics

C Grones, T Eekhout, D Shi, M Neumann… - The Plant …, 2024 - academic.oup.com
Single-cell and single-nucleus RNA-sequencing technologies capture the expression of
plant genes at an unprecedented resolution. Therefore, these technologies are gaining …

Natural polymorphisms in ZmIRX15A affect water‐use efficiency by modulating stomatal density in maize

K Zhang, M Xue, F Qin, Y He… - Plant Biotechnology …, 2023 - Wiley Online Library
Stomatal density (SD) is closely related to crop drought resistance. Understanding the
genetic basis for natural variation in SD may facilitate efforts to improve water‐use efficiency …

Multifaceted role and regulation of aquaporins for efficient stomatal movements

L Ding, AR Fox, F Chaumont - Plant, Cell & Environment, 2024 - Wiley Online Library
Stomata are micropores on the leaf epidermis that allow carbon dioxide (CO2) uptake for
photosynthesis at the expense of water loss through transpiration. Stomata coordinate the …

Stomatal evolution and plant adaptation to future climate

G Chen, Y Qin, J Wang, S Li, F Zeng… - Plant, Cell & …, 2024 - Wiley Online Library
Global climate change is affecting plant photosynthesis and transpiration processes, as well
as increasing weather extremes impacting socio‐political and environmental events and …

[HTML][HTML] Leveraging Single-Cell Populations to Uncover the Genetic Basis of Complex Traits

MAA Minow, AP Marand… - Annual review of genetics, 2023 - annualreviews.org
The ease and throughput of single-cell genomics have steadily improved, and its current
trajectory suggests that surveying single-cell populations will become routine. We discuss …

MINI‐AC: inference of plant gene regulatory networks using bulk or single‐cell accessible chromatin profiles

N Manosalva Pérez, C Ferrari, J Engelhorn… - The Plant …, 2024 - Wiley Online Library
Gene regulatory networks (GRNs) represent the interactions between transcription factors
(TF) and their target genes. Plant GRNs control transcriptional programs involved in growth …