phytools 2.0: an updated R ecosystem for phylogenetic comparative methods (and other things)

LJ Revell - PeerJ, 2024 - peerj.com
Phylogenetic comparative methods comprise the general endeavor of using an estimated
phylogenetic tree (or set of trees) to make secondary inferences: about trait evolution …

Preclinical studies performed in appropriate models could help identify optimal timing of combined chemotherapy and immunotherapy

Y Berckmans, J Ceusters, A Vankerckhoven… - Frontiers in …, 2023 - frontiersin.org
Immune checkpoint inhibitors (ICI) have been revolutionary in the field of cancer therapy.
However, their success is limited to specific indications and cancer types. Recently, the …

Cell-in-cell phenomena across the tree of life

SE Kapsetaki, LH Cisneros, CC Maley - Scientific reports, 2024 - nature.com
Cells in obligately multicellular organisms by definition have aligned fitness interests,
minimum conflict, and cannot reproduce independently. However, some cells eat other cells …

[HTML][HTML] Rapid evolution of genes with anti-cancer functions during the origins of large bodies and cancer resistance in elephants

J Bowman, VJ Lynch - bioRxiv, 2024 - ncbi.nlm.nih.gov
Elephants have emerged as a model system to study the evolution of body size and cancer
resistance because, despite their immense size, they have a very low prevalence of cancer …

Life history traits and cancer prevalence in birds

SE Kapsetaki, ZT Compton, J Dolan… - … Medicine, and Public …, 2024 - academic.oup.com
Background and objectives Cancer is a disease that affects nearly all multicellular life,
including the broad and diverse taxa of Aves. While little is known about the factors that …

[HTML][HTML] Pervasive loss of regulated necrotic cell death genes in elephants, hyraxes, and sea cows (Paenungualta)

M Birkemeier, A Swindle, J Bowman, VJ Lynch - bioRxiv, 2024 - ncbi.nlm.nih.gov
Gene loss can promote phenotypic differences between species, for example, if a gene
constrains phenotypic variation in a trait, its loss allows for the evolution of a greater range of …

Germline mutation rate predicts cancer mortality across 37 vertebrate species

SE Kapsetaki, ZT Compton, W Mellon, O Vincze… - bioRxiv, 2023 - biorxiv.org
The explanation for why some species are more susceptible to cancer than others remains
an area of intense investigation. Cancer evolves in part through the accumulation of …

Unifying Theories in Comparative Oncology

ZT Compton - Cancer through the Lens of Evolution and Ecology, 2024 - taylorfrancis.com
Comparative oncology—the extension of traditional oncology to study cancer across the tree
of life—provides a compelling, comprehensive framework through which to understand and …

[HTML][HTML] The relationship between diet, plasma glucose, and cancer prevalence across vertebrates

SE Kapsetaki, AJ Basile, ZT Compton, SM Rupp… - bioRxiv, 2023 - ncbi.nlm.nih.gov
Could diet and mean plasma glucose concentration (MPGluC) explain the variation in
cancer prevalence across species? We collected diet, MPGluC, and neoplasia data for 160 …

Life History Theory and Evolutionary Strategies to Treat Cancer

S Seyedi - 2023 - keep.lib.asu.edu
Life history theory offers a powerful framework to understand evolutionary selection
pressures and explain how adaptive strategies use the life history trade-off and differences …