HARE: Hardware accelerator for regular expressions

V Gogte, A Kolli, MJ Cafarella… - 2016 49th Annual …, 2016 - ieeexplore.ieee.org
Rapidly processing text data is critical for many technical and business applications.
Traditional software-based tools for processing large text corpora use memory bandwidth …

Accelerating dna sequence analysis using intel (r) xeon phi (tm)

S Memeti, S Pllana - 2015 IEEE Trustcom/BigDataSE/ISPA, 2015 - ieeexplore.ieee.org
Genetic information is increasing exponentially, doubling every 18 months. Analyzing this
information within a reasonable amount of time requires parallel computing resources. While …

Optimization of heterogeneous systems with AI planning heuristics and machine learning: a performance and energy aware approach

S Memeti, S Pllana - Computing, 2021 - Springer
Heterogeneous computing systems provide high performance and energy efficiency.
However, to optimally utilize such systems, solutions that distribute the work across host …

Efficient parallelization of regular expression matching for deep inspection

Z Fu, Z Liu, J Li - 2017 26th International Conference on …, 2017 - ieeexplore.ieee.org
Regular expression matching has been widely used in today's network security systems,
where the payloads of network packets are matched against a set of rules specified by …

A machine learning approach for accelerating DNA sequence analysis

S Memeti, S Pllana - The International Journal of High …, 2018 - journals.sagepub.com
The DNA sequence analysis is a data and computationally intensive problem and therefore
demands suitable parallel computing resources and algorithms. In this paper, we describe …

Combinatorial optimization of work distribution on heterogeneous systems

S Memeti, S Pllana - 2016 45th international conference on …, 2016 - ieeexplore.ieee.org
We describe an approach that uses combinatorial optimization and machine learning to
share the work between the host and device of heterogeneous computing systems such that …

Analyzing large-scale DNA Sequences on Multi-core Architectures

S Memeti, S Pllana - 2015 IEEE 18th International Conference …, 2015 - ieeexplore.ieee.org
Rapid analysis of DNA sequences is important in preventing the evolution of different
viruses and bacteria during an early phase, early diagnosis of genetic predispositions to …

Optimal parameter algorithm for image segmentation

WJ Tian, Y Geng, JC Liu, L Ai - 2009 Second International …, 2009 - ieeexplore.ieee.org
An improved artificial fish swarm algorithm is proposed to search the optimal parameter
combination in this paper. It is concerned with fuzzy entropy definition used for image …

Combinatorial optimization of DNA sequence analysis on heterogeneous systems

S Memeti, S Pllana - Concurrency and Computation: Practice …, 2017 - Wiley Online Library
Analysis of DNA sequences is a data and computational intensive problem, and therefore, it
requires suitable parallel computing resources and algorithms. In this paper, we describe …

Current-based testing for analog and mixed-signal circuits

J Velasco-Medina, M Nicolaidis - … International Conference on …, 1998 - ieeexplore.ieee.org
A new test technique for analog and mixed-signal circuits which employs current signals as
input test stimuli is presented in this paper. With the current-based test technique proposed …