[HTML][HTML] Structure-based methods for computational protein functional site prediction

BKC Dukka - Computational and structural biotechnology journal, 2013 - Elsevier
Due to the advent of high throughput sequencing techniques and structural genomic
projects, the number of gene and protein sequences has been ever increasing …

[HTML][HTML] Recent advances in functional region prediction by using structural and evolutionary information–Remaining problems and future extensions

W Nemoto, A Saito, H Oikawa - Computational and structural biotechnology …, 2013 - Elsevier
Structural genomics projects have solved many new structures with unknown functions. One
strategy to investigate the function of a structure is to computationally find the functionally …

Protein ligand-specific binding residue predictions by an ensemble classifier

X Hu, K Wang, Q Dong - BMC bioinformatics, 2016 - Springer
Background Prediction of ligand binding sites is important to elucidate protein functions and
is helpful for drug design. Although much progress has been made, many challenges still …

Accurate classification of biological and non-biological interfaces in protein crystal structures using subtle covariation signals

Y Fukasawa, K Tomii - Scientific Reports, 2019 - nature.com
Proteins often work as oligomers or multimers in vivo. Therefore, elucidating their oligomeric
or multimeric form (quaternary structure) is crucially important to ascertain their function. X …

Characterisation of novel transcripts in the 3'region of L-type calcium channel genes in human brain

H Lee - 2023 - ora.ox.ac.uk
The alpha-1 subunit (CACNA1 family) of L-type voltage-gated calcium channels (LTCCs)
play significant roles in brain function and neuropsychiatric disorders. Transcription of …

Interface Prediction for GPCR Oligomerization Between Transmembrane Helices

W Nemoto, A Saito - Computational Design of Membrane Proteins, 2021 - Springer
Oligomers of G protein-coupled receptors (GPCRs) are closely related to their biochemical
and biological functions and have been conserved during the course of molecular evolution …

Développement d'outils statistiques d'évaluation de méthodes de criblage virtuel: courbes de prédictivité & Screening Explorer

C Empereur-Mot - 2017 - theses.hal.science
Les méthodes de criblage virtuel sont largement utilisées dans le processus de conception
de médicaments afin de réduire le nombre de composés à tester expérimentalement …

[PDF][PDF] Modulator of Diabetes and Metabolic Syndrome: Silent Proteins, newer Insights

GR Sridhar - J Diabetes Res Ther, 2015 - pdfs.semanticscholar.org
Computational methods are being employed to predict active binding sites of enzymes. The
principal reasons are that the pace of discovery of new proteins is increasing, outpacing the …