[HTML][HTML] Synonymous nucleotide changes drive papillomavirus evolution

KM King, EV Rajadhyaksha, IG Tobey… - Tumour Virus …, 2022 - Elsevier
Papillomaviruses have been evolving alongside their hosts for at least 450 million years.
This review will discuss some of the insights gained into the evolution of this diverse family …

Comparative Analyses of Five Complete Chloroplast Genomes from the Genus Pterocarpus (Fabacaeae)

Z Hong, Z Wu, K Zhao, Z Yang, N Zhang, J Guo… - International Journal of …, 2020 - mdpi.com
Pterocarpus is a genus of trees mainly distributed in tropical Asia, Africa, and South America.
Some species of Pterocarpus are rosewood tree species, having important economic value …

Intraspecific and interspecific variations in the synonymous codon usage in mitochondrial genomes of 8 pleurotus strains

W Gao, X Chen, J He, A Sha, Y Luo, W Xiao, Z Xiong… - BMC genomics, 2024 - Springer
In this study, we investigated the codon bias of twelve mitochondrial core protein coding
genes (PCGs) in eight Pleurotus strains, two of which are from the same species. The results …

The Complete Plastid Genome of Magnolia zenii and Genetic Comparison to Magnoliaceae species

Y Li, SP Sylvester, M Li, C Zhang, X Li, Y Duan… - Molecules, 2019 - mdpi.com
Magnolia zenii is a critically endangered species known from only 18 trees that survive on
Baohua Mountain in Jiangsu province, China. Little information is available regarding its …

Comparative analysis of the complete chloroplast genomes of six threatened subgenus Gynopodium (Magnolia) species

H Xie, L Zhang, C Zhang, H Chang, Z Xi, X Xu - BMC genomics, 2022 - Springer
Abstract Background The subgenus Gynopodium belonging to genus Magnolia have high
ornamental, economic, and ecological value. Subgenus Gynopodium contains eight …

Comparitive Analysis of the Chloroplast Genomes of Three Houpoea Plants

Q Xu, Z Li, N Wu, J Yang, L Yuan, T Zhao, Y Sima, T Xu - Genes, 2023 - mdpi.com
The genus Houpoea belongs to the family Magnoliaceae, and the species in this genus
have important medicinal values. However, the investigation of the correlation between the …

[HTML][HTML] Frameshift variations in the RHD coding sequence: Molecular mechanisms permitting protein expression

WA Flegel, K Srivastava - Transfusion, 2020 - ncbi.nlm.nih.gov
1|. METHODS We searched the Human RhesusBase 6 and GenBank 24 and catalogued all
known frameshift variants. Accompanying the online search, we checked the reference lists …

The Complete Plastid Genome of Rhododendron pulchrum and Comparative Genetic Analysis of Ericaceae Species

J Shen, X Li, X Zhu, X Huang, S Jin - Forests, 2020 - mdpi.com
Background and Objectives: Rhododendron pulchrum Sweet (R. pulchrum) belongs to the
genus Rhododendron (Ericaceae), a valuable horticultural and medicinal plant species …

Molecular structure and phylogenetic analyses of the complete chloroplast genomes of three medicinal plants Conioselinum vaginatum, Ligusticum sinense, and …

XP Wei, XY Zhang, YQ Dong, JL Cheng… - Frontiers in Plant …, 2022 - frontiersin.org
Most plants of Ligusticum have an important medicinal and economic value with a long
history, Ligusticum sinense and L. jeholense (“Gaoben”) has long been used in traditional …

Calculating and comparing codon usage values in rare disease genes highlights codon clustering with disease-and tissue-specific hierarchy

R Rossi, M Fang, L Zhu, C Jiang, C Yu, C Flesia, C Nie… - Plos one, 2022 - journals.plos.org
We designed a novel strategy to define codon usage bias (CUB) in 6 specific small cohorts
of human genes. We calculated codon usage (CU) values in 29 non-disease-causing (NDC) …