The person-to-person transmission landscape of the gut and oral microbiomes
The human microbiome is an integral component of the human body and a co-determinant
of several health conditions,. However, the extent to which interpersonal relations shape the …
of several health conditions,. However, the extent to which interpersonal relations shape the …
Variability of strain engraftment and predictability of microbiome composition after fecal microbiota transplantation across different diseases
Fecal microbiota transplantation (FMT) is highly effective against recurrent Clostridioides
difficile infection and is considered a promising treatment for other microbiome-related …
difficile infection and is considered a promising treatment for other microbiome-related …
Drivers and determinants of strain dynamics following fecal microbiota transplantation
Fecal microbiota transplantation (FMT) is a therapeutic intervention for inflammatory
diseases of the gastrointestinal tract, but its clinical mode of action and subsequent …
diseases of the gastrointestinal tract, but its clinical mode of action and subsequent …
Identification of clinical and ecological determinants of strain engraftment after fecal microbiota transplantation using metagenomics
Fecal microbiota transplantation (FMT) is a promising therapeutic approach for microbiota-
associated pathologies, but our understanding of the post-FMT microbiome assembly …
associated pathologies, but our understanding of the post-FMT microbiome assembly …
Transient suppression of bacterial populations associated with gut health is critical in success of exclusive enteral nutrition for children with Crohn's disease
J Runde, I Veseli, EC Fogarty… - Journal of Crohn's …, 2023 - academic.oup.com
Abstract Background and Aims Exclusive enteral nutrition [EEN] is a dietary intervention to
induce clinical remission in children with active luminal Crohn's disease [CD]. While …
induce clinical remission in children with active luminal Crohn's disease [CD]. While …
Metagenomic strain detection with SameStr: identification of a persisting core gut microbiota transferable by fecal transplantation
Background The understanding of how microbiomes assemble, function, and evolve
requires metagenomic tools that can resolve microbiota compositions at the strain level …
requires metagenomic tools that can resolve microbiota compositions at the strain level …
Rare transmission of commensal and pathogenic bacteria in the gut microbiome of hospitalized adults
Bacterial bloodstream infections are a major cause of morbidity and mortality among
patients undergoing hematopoietic cell transplantation (HCT). Although previous research …
patients undergoing hematopoietic cell transplantation (HCT). Although previous research …
Single-colony sequencing reveals microbe-by-microbiome phylosymbiosis between the cyanobacterium Microcystis and its associated bacteria
OM Pérez-Carrascal, N Tromas, Y Terrat, E Moreno… - Microbiome, 2021 - Springer
Background Cyanobacteria from the genus Microcystis can form large mucilaginous
colonies with attached heterotrophic bacteria—their microbiome. However, the nature of the …
colonies with attached heterotrophic bacteria—their microbiome. However, the nature of the …
Functional profile of host microbiome indicates Clostridioides difficile infection
E Nzabarushimana, H Tang - Gut Microbes, 2022 - Taylor & Francis
Clostridioides difficile infection (CDI) is a gastro-intestinal (GI) infection that illustrates how
perturbations in symbiotic host–microbiome interactions render the GI tract vulnerable to the …
perturbations in symbiotic host–microbiome interactions render the GI tract vulnerable to the …
Scalable microbial strain inference in metagenomic data using StrainFacts
While genome databases are nearing a complete catalog of species commonly inhabiting
the human gut, their representation of intraspecific diversity is lacking for all but the most …
the human gut, their representation of intraspecific diversity is lacking for all but the most …