Interplay of transcription factors orchestrating the biosynthesis of plant alkaloids

RC Godbole, AA Pable, S Singh, VT Barvkar - 3 Biotech, 2022 - Springer
Plants produce a range of secondary metabolites primarily as defence molecules. A plant
has to invest considerable energy to synthesise alkaloids, and sometimes they are even …

Investigation of long non-coding RNAs as regulatory players of grapevine response to powdery and downy mildew infection

G Bhatia, SK Upadhyay, A Upadhyay, K Singh - BMC Plant Biology, 2021 - Springer
Abstract Background Long non-coding RNAs (lncRNAs) are regulatory transcripts of length>
200 nt. Owing to the rapidly progressing RNA-sequencing technologies, lncRNAs are …

Advancing from protein interactomes and gene co-expression networks towards multi-omics-based composite networks: approaches for predicting and extracting …

V Randhawa, S Pathania - Briefings in Functional Genomics, 2020 - academic.oup.com
Prediction of biological interaction networks from single-omics data has been extensively
implemented to understand various aspects of biological systems. However, more recently …

UPLC and ESI-MS analysis of metabolites of Rauvolfia tetraphylla L. and their spatial localization using desorption electrospray ionization (DESI) mass spectrometric …

PM Kumara, RU Shaanker, T Pradeep - Phytochemistry, 2019 - Elsevier
Rauvolfia tetraphylla L.(family Apocynaceae), often referred to as the wild snakeroot plant, is
an important medicinal plant and produces a number of indole alkaloids in its seeds and …

Transcriptome and Co-Expression Network Analyses Identify Key Genes Regulating Nitrogen Use Efficiency in Brassica juncea L.

P Goel, NK Sharma, M Bhuria, V Sharma… - Scientific Reports, 2018 - nature.com
Nitrate is the main source of inorganic nitrogen for plants, which also act as signaling
molecule. Present study was aimed to understand nitrate regulatory mechanism in Brassica …

Comparative transcriptomics reveals candidate transcription factors involved in costunolide biosynthesis in medicinal plant-Saussurea lappa

V Thakur, S Bains, S Pathania, S Sharma… - International journal of …, 2020 - Elsevier
Costunolides, an important sesquiterpene lactone (STL) isolated from Saussurea lappa, are
the major pharmaceutical ingredient of various drug formulations. Identification of the genes …

Chilling Affects Phytohormone and Post-Embryonic Development Pathways during Bud Break and Fruit Set in Apple (Malus domestica Borkh.)

G Kumar, K Gupta, S Pathania, MK Swarnkar… - Scientific Reports, 2017 - nature.com
The availability of sufficient chilling during bud dormancy plays an important role in the
subsequent yield and quality of apple fruit, whereas, insufficient chilling availability …

[HTML][HTML] Identification of Pseudo-R genes in Vitis vinifera and characterization of their role as immunomodulators in host-pathogen interactions

N Garewal, S Pathania, G Bhatia, K Singh - Journal of Advanced Research, 2022 - Elsevier
Introduction Duplication events are fundamental to co-evolution in host-pathogen
interactions. Pseudogenes (Ψs) are dysfunctional paralogs of functional genes and …

Tissue-specific transcriptional biomarkers in medicinal plants: Application of large-scale meta-analysis and computational systems biology

A Tahmasebi, E Ebrahimie, H Pakniyat, M Ebrahimi… - Gene, 2019 - Elsevier
Biosynthesis of secondary metabolites in plant is a complex process, regulated by many
genes and influenced by several factors. In recent years, the next-generation sequencing …

Integrated analysis of smRNAome, transcriptome, and degradome data to decipher microRNAs regulating costunolide biosynthesis in Saussurea lappa

R Kaur, S Pathania, M Kajal, V Thakur, J Kaur, K Singh - Plant Science, 2023 - Elsevier
Saussurea lappa (S. lappa) has been known to synthesize medicinally important,
costunolide. Due to its immense therapeutic importance, understanding of regulatory …