Differential Allelic Expression in the Human Genome: A Robust Approach To Identify Genetic and Epigenetic Cis-Acting Mechanisms Regulating Gene Expression

D Serre, S Gurd, B Ge, R Sladek, D Sinnett… - PLoS …, 2008 - journals.plos.org
The recent development of whole genome association studies has lead to the robust
identification of several loci involved in different common human diseases. Interestingly …

Interferon regulatory factor 8 regulates pathways for antigen presentation in myeloid cells and during tuberculosis

JF Marquis, O Kapoustina, D Langlais, R Ruddy… - PLoS …, 2011 - journals.plos.org
IRF8 (Interferon Regulatory Factor 8) plays an important role in defenses against
intracellular pathogens, including several aspects of myeloid cells function. It is required for …

Interspecific resources: a major tool for quantitative trait locus cloning and speciation research

D L'Hôte, P Laissue, C Serres, X Montagutelli… - …, 2010 - Wiley Online Library
Positional cloning of the quantitative trait locus (QTL) still encounters numerous difficulties,
which explains why thousands of QTL have been mapped, while only a few have been …

Mapping of clinical and expression quantitative trait loci in a sex-dependent effect of host susceptibility to mouse-adapted influenza H3N2/HK/1/68

GA Boivin, J Pothlichet, E Skamene… - The Journal of …, 2012 - journals.aai.org
Seasonal influenza outbreaks and recurrent influenza pandemics present major challenges
to public health. By studying immunological responses to influenza in different host species …

Interpretation of knockout experiments: the congenic footprint

LC Schalkwyk, C Fernandes, MW Nash… - Genes, Brain and …, 2007 - Wiley Online Library
In gene targeting experiments, the importance of genetic background is now widely
appreciated, and knockout alleles are routinely backcrossed onto a standard inbred …

Genome-wide detection of allelic gene expression in hepatocellular carcinoma cells using a human exome SNP chip

YM Park, HS Cheong, JK Lee - Gene, 2014 - Elsevier
Allelic variations in gene expression influence many biological responses and cause
phenotypic variations in humans. In this study, Illumina Human Exome BeadChips …

Extent of differential allelic expression of candidate breast cancer genes is similar in blood and breast

AT Maia, I Spiteri, AJX Lee, M O'Reilly, L Jones… - Breast cancer …, 2009 - Springer
Introduction Normal gene expression variation is thought to play a central role in inter-
individual variation and susceptibility to disease. Regulatory polymorphisms in cis-acting …

Interspecific Recombinant Congenic Strains Between C57BL/6 and Mice of the Mus spretus Species: A Powerful Tool to Dissect Genetic Control of Complex Traits

G Burgio, M Szatanik, JL Guénet, MR Arnau… - Genetics, 2007 - academic.oup.com
Complex traits are under the genetic control of multiple genes, often with weak effects and
strong epistatic interactions. We developed two new collections of mouse strains to improve …

Cis-regulatory variations: A study of SNPs around genes showing cis-linkage in segregating mouse populations

D GuhaThakurta, T Xie, M Anand, SW Edwards, G Li… - BMC genomics, 2006 - Springer
Background Changes in gene expression are known to be responsible for phenotypic
variation and susceptibility to diseases. Identification and annotation of the genomic …

Gene expression profiling distinguishes radiation-induced fibrosing alveolitis from alveolitis in mice

A Paun, AM Lemay, CK Haston - Radiation research, 2010 - meridian.allenpress.com
Thoracic cavity radiotherapy is limited by the development of alveolitis and fibrosis in
susceptible patients. To define the response to 18 Gy pulmonary irradiation in mice at the …