POLQ seals post-replicative ssDNA gaps to maintain genome stability in BRCA-deficient cancer cells

O Belan, M Sebald, M Adamowicz, R Anand… - Molecular cell, 2022 - cell.com
POLQ is a key effector of DSB repair by microhomology-mediated end-joining (MMEJ) and is
overexpressed in many cancers. POLQ inhibitors confer synthetic lethality in HR and …

[HTML][HTML] PARP1-DNA co-condensation drives DNA repair site assembly to prevent disjunction of broken DNA ends

N Chappidi, T Quail, S Doll, LT Vogel, R Aleksandrov… - Cell, 2024 - cell.com
DNA double-strand breaks (DSBs) are repaired at DSB sites. How DSB sites assemble and
how broken DNA is prevented from separating is not understood. Here we uncover that the …

Visualization of direct and diffusion-assisted RAD51 nucleation by full-length human BRCA2 protein

O Belan, L Greenhough, L Kuhlen, R Anand… - Molecular cell, 2023 - cell.com
Homologous recombination (HR) is essential for error-free repair of DNA double-strand
breaks, perturbed replication forks (RFs), and post-replicative single-stranded DNA (ssDNA) …

FANCD2–FANCI surveys DNA and recognizes double-to single-stranded junctions

P Alcón, AP Kaczmarczyk, KK Ray, T Liolios… - Nature, 2024 - nature.com
DNA crosslinks block DNA replication and are repaired by the Fanconi anaemia pathway.
The FANCD2–FANCI (D2–I) protein complex is central to this process as it initiates repair by …

Insights into the control of RAD51 nucleoprotein filament dynamics from single-molecule studies

F Morati, M Modesti - Current Opinion in Genetics & Development, 2021 - Elsevier
Genomic integrity depends on the RecA/RAD51 protein family. Discovered over five
decades ago with the founder bacterial RecA protein, eukaryotic RAD51 is an ATP …

Search and processing of Holliday junctions within long DNA by junction-resolving enzymes

AP Kaczmarczyk, AC Déclais, MD Newton… - Nature …, 2022 - nature.com
Resolution of Holliday junctions is a critical intermediate step of homologous recombination
in which junctions are processed by junction-resolving endonucleases. Although binding …

De novo fabrication of custom-sequence plasmids for the synthesis of long DNA constructs with extrahelical features

DR Montero, Z Liu, NH Dekker - Biophysical journal, 2024 - cell.com
DNA constructs for single-molecule experiments often require specific sequences and/or
extrahelical/noncanonical structures to study DNA-processing mechanisms. The precise …

Long DNA constructs to study helicases and nucleic acid translocases using optical tweezers

C Aicart-Ramos, S Hormeno, OJ Wilkinson… - Methods in …, 2022 - Elsevier
Single molecule biophysics experiments for the study of DNA-protein interactions usually
require production of a homogeneous population of long DNA molecules with controlled …

Visualizing the dynamics of DNA replication and repair at the single-molecule level

S Berger, G Chistol - Methods in cell biology, 2024 - Elsevier
During cell division, the genome of each eukaryotic cell is copied by thousands of
replisomes—large protein complexes consisting of several dozen proteins. Recent studies …

[PDF][PDF] Mechanics and execution of homologous recombination: a single-molecule view

O Belan - 2022 - core.ac.uk
Homologous recombination (HR) is an essential mechanism for the repair of toxic DNA
double-strand breaks (DSBs), which, when not repaired accurately, can give rise to cancer …