Trends in microbial community composition and function by soil depth

D Naylor, R McClure, J Jansson - Microorganisms, 2022 - mdpi.com
Microbial communities play important roles in soil health, contributing to processes such as
the turnover of organic matter and nutrient cycling. As soil edaphic properties such as …

The Ecology of Acidobacteria: Moving beyond Genes and Genomes

AM Kielak, CC Barreto, GA Kowalchuk… - Frontiers in …, 2016 - frontiersin.org
The phylum Acidobacteria is one of the most widespread and abundant on the planet, yet
remarkably our knowledge of the role of these diverse organisms in the functioning of …

Microbial diversity drives multifunctionality in terrestrial ecosystems

M Delgado-Baquerizo, FT Maestre, PB Reich… - Nature …, 2016 - nature.com
Despite the importance of microbial communities for ecosystem services and human
welfare, the relationship between microbial diversity and multiple ecosystem functions and …

Drought and host selection influence bacterial community dynamics in the grass root microbiome

D Naylor, S DeGraaf, E Purdom… - The ISME …, 2017 - academic.oup.com
Root endophytes have been shown to have important roles in determining host fitness under
periods of drought stress, and yet the effect of drought on the broader root endosphere …

Diversity and heritability of the maize rhizosphere microbiome under field conditions

JA Peiffer, A Spor, O Koren, Z Jin… - Proceedings of the …, 2013 - National Acad Sciences
The rhizosphere is a critical interface supporting the exchange of resources between plants
and their associated soil environment. Rhizosphere microbial diversity is influenced by the …

Microbial ecology of hot desert edaphic systems

TP Makhalanyane, A Valverde… - FEMS microbiology …, 2015 - academic.oup.com
A significant proportion of the Earth's surface is desert or in the process of desertification.
The extreme environmental conditions that characterize these areas result in a surface that …

Deciphering bacterial mechanisms of root colonization

HE Knights, B Jorrin, TL Haskett… - Environmental …, 2021 - Wiley Online Library
Bacterial colonization of the rhizosphere is critical for the establishment of plant–bacteria
interactions that represent a key determinant of plant health and productivity. Plants …

Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere

G Berg, K Smalla - FEMS microbiology ecology, 2009 - academic.oup.com
The rhizosphere is of central importance not only for plant nutrition, health and quality but
also for microorganism-driven carbon sequestration, ecosystem functioning and nutrient …

Microbial biogeography: putting microorganisms on the map

JBH Martiny, BJM Bohannan, JH Brown… - Nature Reviews …, 2006 - nature.com
We review the biogeography of microorganisms in light of the biogeography of
macroorganisms. A large body of research supports the idea that free-living microbial taxa …

Metagenomics: application of genomics to uncultured microorganisms

J Handelsman - Microbiology and molecular biology reviews, 2004 - Am Soc Microbiol
Metagenomics (also referred to as environmental and community genomics) is the genomic
analysis of microorganisms by direct extraction and cloning of DNA from an assemblage of …