Link prediction in complex networks has attracted increasing attention from both physical
and computer science communities. The algorithms can be used to extract missing …

The field of phylogenetics is entering a new era in which trees of historical relationships
between species are increasingly inferred from multilocus and genomic data. A major …

The idea that all life on earth traces back to a common origin dates back at least to Charles
Darwin's Origin of Species. Ever since, biologists have tried to piece together parts of this …

Ecological Models and Data in R is the first truly practical introduction to modern statistical
methods for ecology. In step-by-step detail, the book teaches ecology graduate students and …

The reconstruction of the Tree of Life has relied almost entirely on concatenation methods,
which do not accommodate gene tree heterogeneity, a property that simulations and theory …

The problem of missing link prediction in complex networks has attracted much attention
recently. Two difficulties in link prediction are the sparsity and huge size of the target …

The advent and maturation of algorithms for estimating species trees—phylogenetic trees
that allow gene tree heterogeneity and whose tips represent lineages, populations and …

The field of molecular evolution has experienced explosive growth in recent years due to the
rapid accumulation of genetic sequence data, continuous improvements to computer …

Although multiple gene sequences are becoming increasingly available for molecular
phylogenetic inference, the analysis of such data has largely relied on inference methods …

Molecular analyses of turtle relationships have overturned prevailing morphological
hypotheses and prompted the development of a new taxonomy. Here we provide the first …