Developing diagnostic SNP panels for the identification of true fruit flies (Diptera: Tephritidae) within the limits of COI-based species delimitation
JE Frey, L Guillén, B Frey, J Samietz, J Rull… - BMC Evolutionary …, 2013 - Springer
Background Rapid and reliable identification of quarantine pests is essential for plant
inspection services to prevent introduction of invasive species. For insects, this may be a …
inspection services to prevent introduction of invasive species. For insects, this may be a …
Assessing effectiveness of many-objective evolutionary algorithms for selection of tag SNPs
Background Studies on genome-wide associations help to determine the cause of many
genetic diseases. Genome-wide associations typically focus on associations between single …
genetic diseases. Genome-wide associations typically focus on associations between single …
Informative SNPs selection based on two-locus and multilocus linkage disequilibrium: criteria of max-correlation and min-redundancy
X Li, B Liao, L Cai, Z Cao, W Zhu - IEEE/ACM Transactions on …, 2013 - ieeexplore.ieee.org
Currently, there are lots of methods to select informative SNPs for haplotype reconstruction.
However, there are still some challenges that render them ineffective for large data sets …
However, there are still some challenges that render them ineffective for large data sets …
[HTML][HTML] Multiple ant colony algorithm method for selecting tag SNPs
B Liao, X Li, W Zhu, R Li, S Wang - Journal of biomedical informatics, 2012 - Elsevier
The search for the association between complex disease and single nucleotide
polymorphisms (SNPs) or haplotypes has recently received great attention. Finding a set of …
polymorphisms (SNPs) or haplotypes has recently received great attention. Finding a set of …
A hierarchical clustering method of selecting kernel SNP to unify informative SNP and tag SNP
B Liao, X Li, L Cai, Z Cao… - IEEE/ACM Transactions on …, 2014 - ieeexplore.ieee.org
Various strategies can be used to select representative single nucleotide polymorphisms
(SNPs) from a large number of SNPs, such as tag SNP for haplotype coverage and …
(SNPs) from a large number of SNPs, such as tag SNP for haplotype coverage and …
Discovering genome-wide tag SNPs based on the mutual information of the variants
Exploring linkage disequilibrium (LD) patterns among the single nucleotide polymorphism
(SNP) sites can improve the accuracy and cost-effectiveness of genomic association studies …
(SNP) sites can improve the accuracy and cost-effectiveness of genomic association studies …
A fine-grained CUDA implementation of the multi-objective evolutionary approach NSGA-II: potential impact for computational and systems biology applications
Many computational and systems biology challenges, in particular those related to big data
analysis, can be formulated as optimization problems and therefore can be addressed using …
analysis, can be formulated as optimization problems and therefore can be addressed using …
A novel method to select informative SNPs and their application in genetic association studies
B Liao, X Li, W Zhu, Z Cao - IEEE/ACM Transactions on …, 2012 - ieeexplore.ieee.org
The association studies between complex diseases and single nucleotide polymorphisms
(SNPs) or haplotypes have recently received great attention. However, these studies are …
(SNPs) or haplotypes have recently received great attention. However, these studies are …
Multi objective SNP selection using pareto optimality
Biomarker discovery is a challenging task of bioinformatics especially when targeting high
dimensional problems such as SNP (single nucleotide polymorphism) datasets. Various …
dimensional problems such as SNP (single nucleotide polymorphism) datasets. Various …
使用智慧型三目標基因演算法選取標籤單核苷酸多型性
林玉祥， 何信瑩 - 2010 - ir.lib.nycu.edu.tw
人類的DNA 序列中包含各種遺傳變異性, 其中最常被發現的遺傳變異為SNP (Single Nucleotide
Polymorphism; SNP). 由多個SNPs 所組成之集合稱為Haplotype (Haplotype) …
Polymorphism; SNP). 由多個SNPs 所組成之集合稱為Haplotype (Haplotype) …