Neuron tracing from light microscopy images: automation, deep learning and bench testing

Y Liu, G Wang, GA Ascoli, J Zhou, L Liu - Bioinformatics, 2022 - academic.oup.com
Motivation Large-scale neuronal morphologies are essential to neuronal typing, connectivity
characterization and brain modeling. It is widely accepted that automation is critical to the …

Local intensity order transformation for robust curvilinear object segmentation

T Shi, N Boutry, Y Xu, T Géraud - IEEE Transactions on Image …, 2022 - ieeexplore.ieee.org
Segmentation of curvilinear structures is important in many applications, such as retinal
blood vessel segmentation for early detection of vessel diseases and pavement crack …

ICE-GAN: Identity-aware and capsule-enhanced GAN with graph-based reasoning for micro-expression recognition and synthesis

J Yu, C Zhang, Y Song, W Cai - 2021 international joint …, 2021 - ieeexplore.ieee.org
Micro-expressions are reflections of people's true feelings and motives, which attract an
increasing number of researchers into the study of automatic facial micro-expression …

Tracing weak neuron fibers

Y Liu, Y Zhong, X Zhao, L Liu, L Ding, H Peng - Bioinformatics, 2023 - academic.oup.com
Motivation Precise reconstruction of neuronal arbors is important for circuitry mapping. Many
auto-tracing algorithms have been developed toward full reconstruction. However, it is still …

PointNeuron: 3D Neuron Reconstruction via Geometry and Topology Learning of Point Clouds

R Zhao, H Wang, C Zhang… - Proceedings of the IEEE …, 2023 - openaccess.thecvf.com
Digital neuron reconstruction from 3D microscopy images is an essential technique for
investigating brain connectomics and neuron morphology. Existing reconstruction …

Voxel-wise cross-volume representation learning for 3D neuron reconstruction

H Wang, C Zhang, J Yu, Y Song, S Liu… - Machine Learning in …, 2021 - Springer
Automatic 3D neuron reconstruction is critical for analysing the morphology and functionality
of neurons in brain circuit activities. However, the performance of existing tracing algorithms …

AI-enhanced 3D biomedical data analytics for neuronal structure reconstruction

H Wang, Y Song, Z Tang, C Zhang, J Yu, D Liu… - Humanity Driven AI …, 2021 - Springer
Investigation of the 3D neuron morphology plays a critical part in understanding functions
and activities in brain circuits, towards discovering how the brain develops in health and …

Neuronal Image Reconstruction

Y Liu, K Chen, H Peng - Frontiers in Bioimage Informatics …, 2024 - World Scientific
Neurons are the fundamental units responsible for the structure and function of the brain,
making their morphologies crucial for characterizing the brain. In this chapter, we provide an …