Personalising glioblastoma medicine: explant organoid applications, challenges and future perspectives

N Skarne, RCJ D'Souza, HM Palethorpe… - Acta Neuropathologica …, 2025 - Springer
Glioblastoma (GBM) is a highly aggressive adult brain cancer, characterised by poor
prognosis and a dismal five-year survival rate. Despite significant knowledge gains in …

Spatial assessment of stromal B cell aggregates predicts response to checkpoint inhibitors in unresectable melanoma

JW Smithy, X Peng, FD Ehrich, AP Moy, M Yosofvand… - medRxiv, 2024 - medrxiv.org
Quantitative assessment of multiplex immunofluorescence (mIF) data represents a powerful
tool for immunotherapy biomarker discovery in melanoma and other solid tumors. In addition …

[HTML][HTML] Harnessing Molecular Insights for Translational Impact: Highlights from the Special Issue Titled “New Insights in Translational Bioinformatics”

C Quek - International Journal of Molecular Sciences, 2025 - mdpi.com
The field of translational bioinformatics is rapidly evolving, driving the convergence of
molecular sciences and computational methods with their applications in industrial and …

Integration of Imaging-based and Sequencing-based Spatial Omics Mapping on the Same Tissue Section via DBiTplus

A Enninful, Z Zhang, D Klymyshyn, H Zong, Z Bai… - bioRxiv, 2024 - biorxiv.org
Spatially mapping the transcriptome and proteome in the same tissue section can
significantly advance our understanding of heterogeneous cellular processes and connect …

scMODAL: A general deep learning framework for comprehensive single-cell multi-omics data alignment with feature links

G Wang, J Zhao, Y Lin, T Liu, Y Zhao, H Zhao - bioRxiv, 2024 - biorxiv.org
Recent advancements in single-cell technologies have enabled comprehensive
characterization of cellular states through transcriptomic, epigenomic, and proteomic …

[HTML][HTML] Tumor microenvironment governs the prognostic landscape of immunotherapy for head and neck squamous cell carcinoma: A computational model-guided …

P Bhattacharya, A Linnenbach, AP South… - …, 2024 - pmc.ncbi.nlm.nih.gov
Immune checkpoint inhibition (ICI) has emerged as a critical treatment strategy for
squamous cell carcinoma of the head and neck (HNSCC) that halts the immune escape of …