Accurate identification of structural variations from cancer samples
Structural variations (SVs) are commonly found in cancer genomes. They can cause gene
amplification, deletion and fusion, among other functional consequences. With an average …
amplification, deletion and fusion, among other functional consequences. With an average …
Fast and efficient Rmap assembly using the Bi-labelled de Bruijn graph
Genome wide optical maps are high resolution restriction maps that give a unique numeric
representation to a genome. They are produced by assembling hundreds of thousands of …
representation to a genome. They are produced by assembling hundreds of thousands of …
Finding Overlapping Rmaps via Clustering
K Mukherjee, D Dole-Muinos, M Rossi… - IEEE/ACM …, 2021 - ieeexplore.ieee.org
Optical mapping is a method for creating high resolution restriction maps of an entire
genome. Optical mapping has been largely automated, and first produces single molecule …
genome. Optical mapping has been largely automated, and first produces single molecule …
Computational Methods for Biological Sequential Pattern Analysis
C Hong - 2022 - search.proquest.com
The study of sequential patterns is one of the focuses in bioinformatics, since the human
genome is in sequential form. To better decode the underlying biological mechanism …
genome is in sequential form. To better decode the underlying biological mechanism …
Finding Overlapping Rmaps via Gaussian Mixture Model Clustering
K Mukherjee, M Rossi, D Dole-Muinos, A Ajayi… - bioRxiv, 2021 - biorxiv.org
Optical mapping is a method for creating high resolution restriction maps of an entire
genome. Optical mapping has been largely automated, and first produces single molecule …
genome. Optical mapping has been largely automated, and first produces single molecule …
Algorithms for Single-Molecule Optical Maps
K Mukherjee - 2021 - search.proquest.com
Optical maps are high resolution restriction maps that give a unique numeric representation
to a genome. Used in concert with sequence reads, they provide a useful tool for genome …
to a genome. Used in concert with sequence reads, they provide a useful tool for genome …
Data Science Methods with Applications to Genetic Sequencing
W Li - 2020 - search.proquest.com
DATA SCIENCE METHODS WITH APPLICATIONS TO GENETIC SEQUENCING Page 1 DATA
SCIENCE METHODS WITH APPLICATIONS TO GENETIC SEQUENCING Weiwei Li A …
SCIENCE METHODS WITH APPLICATIONS TO GENETIC SEQUENCING Weiwei Li A …