Integration of advanced technologies for plant variety and cultivar identification

MMF Azizi, HY Lau, N Abu-Bakar - Journal of biosciences, 2021 - Springer
Identification of plant variety and cultivar is pivotal in the agricultural sector due to the
abundance of plant varieties and cultivars developed in many crop species. However, plant …

Kompetitive allele specific PCR (KASP): a singleplex genotyping platform and its application

U Majeed, E Darwish… - Journal of Agricultural …, 2018 - archive.sdpublishers.com
Single nucleotide polymorphism (SNP) can be detected by mining sequence databases or
by using different singleplex or multiplex SNP genotyping platforms. Development of high …

Genomic-assisted haplotype analysis and the development of high-throughput SNP markers for salinity tolerance in soybean

G Patil, T Do, TD Vuong, B Valliyodan, JD Lee… - Scientific Reports, 2016 - nature.com
Soil salinity is a limiting factor of crop yield. The soybean is sensitive to soil salinity and a
dominant gene, Glyma03g32900 is primarily responsible for salt-tolerance. The …

Comparison of three PCR-based assays for SNP genotyping in plants

C Broccanello, C Chiodi, A Funk, JM McGrath… - Plant methods, 2018 - Springer
Background PCR allelic discrimination technologies have broad applications in the
detection of single nucleotide polymorphisms (SNPs) in genetics and genomics. The use of …

[PDF][PDF] Single nucleotide polymorphism (SNP) discovery and kompetitive allele-specific PCR (KASP) marker development with Korean japonica rice varieties

KS Cheon, J Baek, YI Cho, YM Jeong… - Plant Breed …, 2018 - researchgate.net
Genome resequencing by next-generation sequencing technology can reveal numerous
single nucleotide polymorphisms (SNPs) within a closely-related cultivar group, which would …

ANNEXIN1 mediates calcium‐dependent systemic defense in Arabidopsis plants upon herbivory and wounding

J Malabarba, AK Meents, M Reichelt… - New …, 2021 - Wiley Online Library
Cellular calcium (Ca) transients are endogenous signals involved in local and systemic
signaling and defense activation upon environmental stress, including wounding and …

Genetic analysis of protein content and oil content in soybean by genome-wide association study

H Jin, X Yang, H Zhao, X Song, YD Tsvetkov… - Frontiers in Plant …, 2023 - frontiersin.org
Soybean seed protein content (PC) and oil content (OC) have important economic value.
Detecting the loci/gene related to PC and OC is important for the marker-assisted selection …

Advantages of Amplifluor-like SNP markers over KASP in plant genotyping

S Jatayev, A Kurishbayev, L Zotova, G Khasanova… - BMC Plant …, 2017 - Springer
Abstract Background KASP (KBioscience Competitive Allele Specific PCR) and Amplifluor
(Amplification with fluorescence) SNP markers are two prominent technologies based upon …

Development of genic KASP SNP markers from RNA-Seq data for map-based cloning and marker-assisted selection in maize

Z Chen, D Tang, J Ni, P Li, L Wang, J Zhou, C Li… - BMC Plant …, 2021 - Springer
Background Maize is one of the most important field crops in the world. Most of the key
agronomic traits, including yield traits and plant architecture traits, are quantitative. Fine …

Comparison of SNP and CAPS markers application in genetic research in wheat and barley

Y Shavrukov - BMC Plant Biology, 2016 - Springer
Background Barley and bread wheat show large differences in frequencies of Single
Nucleotide Polymorphism (SNP) as determined from genome-wide studies. These …