Structural genomic variants (SVs) are ubiquitous and play a major role in adaptation and
speciation. Yet, comparative and population genomics have focused predominantly on gene …

Understanding the distribution of crossovers along chromosomes is crucial to evolutionary
genomics because the crossover rate determines how strongly a genome region is …

Genomics promises comprehensive surveying of genomes and metagenomes, but rapidly
changing technologies and expanding data volumes make evaluation of completeness a …

Insects are the largest group of animals on the planet and have a huge impact on human life
by providing resources, transmitting diseases, and damaging agricultural crop production …

We used 20 de novo genome assemblies to probe the speciation history and architecture of
gene flow in rapidly radiating Heliconius butterflies. Our tests to distinguish incomplete …

Chromosomal inversions are ubiquitous in genomes and often coordinate complex
phenotypes, such as the covariation of behavior and morphology in many birds, fishes …

Hybridisation and introgression can dramatically alter the relationships among groups of
species, leading to phylogenetic discordance across the genome and between populations …

Hi-C contact maps are valuable for genome assembly (;;). Recently, we developed Juicebox,
a system for the visual exploration of Hi-C data, and 3D-DNA, an automated pipeline for …

We introduce the concept of topology weighting, a method for quantifying relationships
between taxa that are not necessarily monophyletic, and visualizing how these relationships …

Identifying the genomic changes that control morphological variation and understanding
how they generate diversity is a major goal of evolutionary biology. In Heliconius butterflies …