[图书][B] RNA, the epicenter of genetic information

J Mattick, P Amaral - 2023 - library.oapen.org
The origin story and emergence of molecular biology is muddled. The early triumphs in
bacterial genetics and the complexity of animal and plant genomes complicate an intricate …

Computational methods to study DNA: DNA: RNA triplex formation by lncRNAs

T Warwick, RP Brandes, MS Leisegang - Non-coding RNA, 2023 - mdpi.com
Long non-coding RNAs (lncRNAs) impact cell function via numerous mechanisms. In the
nucleus, interactions between lncRNAs and DNA and the consequent formation of non …

Isolation and genome-wide characterization of cellular DNA: RNA triplex structures

N Sentürk Cetin, CC Kuo, T Ribarska, R Li… - Nucleic acids …, 2019 - academic.oup.com
RNA can directly bind to purine-rich DNA via Hoogsteen base pairing, forming a DNA: RNA
triple helical structure that anchors the RNA to specific sequences and allows guiding of …

lncRNA PAPAS tethered to the rDNA enhancer recruits hypophosphorylated CHD4/NuRD to repress rRNA synthesis at elevated temperatures

Z Zhao, N Sentürk, C Song, I Grummt - Genes & development, 2018 - genesdev.cshlp.org
Attenuation of pre-rRNA synthesis in response to elevated temperature is accompanied by
increased levels of PAPAS (“promoter and pre-rRNA antisense”), a long noncoding RNA …

HIF1α-AS1 is a DNA: DNA: RNA triplex-forming lncRNA interacting with the HUSH complex

MS Leisegang, JK Bains, S Seredinski, JA Oo… - Nature …, 2022 - nature.com
Abstract DNA: DNA: RNA triplexes that are formed through Hoogsteen base-pairing of the
RNA in the major groove of the DNA duplex have been observed in vitro, but the extent to …

Long non-coding RNA HOTAIR in central nervous system disorders: new insights in pathogenesis, diagnosis, and therapeutic potential

J Wang, J Zhao, P Hu, L Gao, S Tian… - Frontiers in Molecular …, 2022 - frontiersin.org
Central nervous system (CNS) disorders, such as ischemic stroke, neurodegenerative
diseases, multiple sclerosis, traumatic brain injury, and corresponding neuropathological …

Prediction of lncRNAs and their interactions with nucleic acids: benchmarking bioinformatics tools

IV Antonov, E Mazurov, M Borodovsky… - Briefings in …, 2019 - academic.oup.com
The genomes of mammalian species are pervasively transcribed producing as many
noncoding as protein-coding RNAs. There is a growing body of evidence supporting their …

Epigenetic regulation of gene expression in Chinese Hamster Ovary cells in response to the changing environment of a batch culture

I Hernandez, H Dhiman, G Klanert… - Biotechnology and …, 2019 - Wiley Online Library
The existence of dynamic cellular phenotypes in changing environmental conditions is of
major interest for cell biologists who aim to understand the mechanism and sequence of …

The chromatin–triple helix connection

R Maldonado, G Längst - Biological Chemistry, 2023 - degruyter.com
Mammalian genomes are extensively transcribed, producing a large number of coding and
non-coding transcripts. A large fraction of the nuclear RNAs is physically associated with …

Epigenetic regulation by lncRNAs: an overview focused on UCA1 in colorectal cancer

B Neve, N Jonckheere, A Vincent, I Van Seuningen - Cancers, 2018 - mdpi.com
Colorectal cancers have become the second leading cause of cancer-related deaths. In
particular, acquired chemoresistance and metastatic lesions occurring in colorectal cancer …