Transformer architecture and attention mechanisms in genome data analysis: a comprehensive review

SR Choi, M Lee - Biology, 2023 - mdpi.com
Simple Summary The rapidly advancing field of deep learning, specifically transformer-
based architectures and attention mechanisms, has found substantial applicability in …

Deep learning techniques with genomic data in cancer prognosis: A comprehensive review of the 2021–2023 literature

M Lee - Biology, 2023 - mdpi.com
Simple Summary The ongoing advancements in deep learning, notably its use in predicting
cancer survival through genomic data analysis, calls for an up-to-date review. This paper …

Study of MDM2 as Prognostic Biomarker in Brain-LGG Cancer and Bioactive Phytochemicals Inhibit the p53-MDM2 Pathway: A Computational Drug Development …

P Biswas, S Bibi, Q Yousafi, A Mehmood, S Saleem… - Molecules, 2023 - mdpi.com
An evaluation of the expression and predictive significance of the MDM2 gene in brain lower-
grade glioma (LGG) cancer was carried out using onco-informatics pipelines. Several …

Mathematical analysis and performance evaluation of the gelu activation function in deep learning

M Lee - Journal of Mathematics, 2023 - Wiley Online Library
Selecting the most suitable activation function is a critical factor in the effectiveness of deep
learning models, as it influences their learning capacity, stability, and computational …

GELU activation function in deep learning: a comprehensive mathematical analysis and performance

M Lee - arXiv preprint arXiv:2305.12073, 2023 - arxiv.org
Selecting the most suitable activation function is a critical factor in the effectiveness of deep
learning models, as it influences their learning capacity, stability, and computational …

Multimodal adversarial representation learning for breast cancer prognosis prediction

X Du, Y Zhao - Computers in Biology and Medicine, 2023 - Elsevier
With the increasing incidence of breast cancer, accurate prognosis prediction of breast
cancer patients is a key issue in current cancer research, and it is also of great significance …

The geometry of feature space in deep learning models: a holistic perspective and comprehensive review

M Lee - Mathematics, 2023 - mdpi.com
As the field of deep learning experiences a meteoric rise, the urgency to decipher the
complex geometric properties of feature spaces, which underlie the effectiveness of diverse …

Deep Learning Approaches for lncRNA-Mediated Mechanisms: A Comprehensive Review of Recent Developments

Y Kim, M Lee - International Journal of Molecular Sciences, 2023 - mdpi.com
This review paper provides an extensive analysis of the rapidly evolving convergence of
deep learning and long non-coding RNAs (lncRNAs). Considering the recent advancements …

OrgUNETR: Utilizing Organ Information and Squeeze and Excitation Block for Improved Tumor Segmentation

SR Choi, J Lee, M Lee - IEEE Access, 2024 - ieeexplore.ieee.org
Convolutional Neural Networks (CNNs) have demonstrated remarkable performance in
medical image segmentation tasks, with the U-Net architecture being a prominent example …

SurvRNC: Learning Ordered Representations for Survival Prediction using Rank-N-Contrast

N Saeed, M Ridzuan, FA Maani, H Alasmawi… - arXiv preprint arXiv …, 2024 - arxiv.org
Predicting the likelihood of survival is of paramount importance for individuals diagnosed
with cancer as it provides invaluable information regarding prognosis at an early stage. This …