R Acín-Pérez, MP Bayona-Bafaluy… - Human molecular …, 2003 - academic.oup.com
We report here the identification of a cell line containing single and double missense mutations in cytochrome c oxidase (COX) subunit I gene of mouse mitochondrial DNA …
K Deckert, SJ Budiardjo, LC Brunner… - Journal of the …, 2012 - ACS Publications
Ligand-dependent activity has been engineered into enzymes for purposes ranging from controlling cell morphology to reprogramming cellular signaling pathways. Where these …
Y Xia, N DiPrimio, TR Keppel, B Vo… - Journal of the …, 2013 - ACS Publications
The ability to selectively activate function of particular proteins via pharmacological agents is a longstanding goal in chemical biology. Recently, we reported an approach for designing a …
Cavities and clefts are frequently important sites of interaction between natural enzymes or receptors and their corresponding substrate or ligand molecules and exemplify the types of …
M Bueno, N Cremades, JL Neira, J Sancho - Journal of molecular biology, 2006 - Elsevier
Most proteins contain small cavities that can be filled by replacing cavity-lining residues by larger ones. Since shortening mutations in hydrophobic cores tend to destabilize proteins, it …
Although core residues can sometimes be replaced by shorter ones without introducing significant changes in protein structure, the energetic consequences are typically large and …
BK Muralidhara, L Sun, S Negi, JR Halpert - Journal of molecular biology, 2008 - Elsevier
Structural plasticity of mammalian cytochromes P450 (CYP) has recently been explored in our laboratory and elsewhere to understand the ligand-binding promiscuity. CYP2B4 …
VA Risso, JP Acierno, S Capaldi, HL Monaco… - Protein …, 2012 - Wiley Online Library
Abstract β‐lactamases confer antibiotic resistance, one of the most serious world‐wide health problems, and are an excellent theoretical and experimental model in the study of …
Proteins could be used to carry and deliver small compounds. As a tool for designing ligand binding sites in protein cores, a three-step virtual screening method is presented that has …