Toward systematic review automation: a practical guide to using machine learning tools in research synthesis

IJ Marshall, BC Wallace - Systematic reviews, 2019 - Springer
Technologies and methods to speed up the production of systematic reviews by reducing
the manual labour involved have recently emerged. Automation has been proposed or used …

Text mining approaches for dealing with the rapidly expanding literature on COVID-19

LL Wang, K Lo - Briefings in Bioinformatics, 2021 - academic.oup.com
More than 50 000 papers have been published about COVID-19 since the beginning of
2020 and several hundred new papers continue to be published every day. This incredible …

Using text mining for study identification in systematic reviews: a systematic review of current approaches

A O'Mara-Eves, J Thomas, J McNaught, M Miwa… - Systematic reviews, 2015 - Springer
Background The large and growing number of published studies, and their increasing rate of
publication, makes the task of identifying relevant studies in an unbiased way for inclusion in …

Reducing waste from incomplete or unusable reports of biomedical research

P Glasziou, DG Altman, P Bossuyt, I Boutron, M Clarke… - The Lancet, 2014 - thelancet.com
Research publication can both communicate and miscommunicate. Unless research is
adequately reported, the time and resources invested in the conduct of research is wasted …

[HTML][HTML] A corpus with multi-level annotations of patients, interventions and outcomes to support language processing for medical literature

B Nye, JJ Li, R Patel, Y Yang, IJ Marshall… - Proceedings of the …, 2018 - ncbi.nlm.nih.gov
We present a corpus of 5,000 richly annotated abstracts of medical articles describing
clinical randomized controlled trials. Annotations include demarcations of text spans that …

Systematic review automation technologies

G Tsafnat, P Glasziou, MK Choong, A Dunn… - Systematic reviews, 2014 - Springer
Systematic reviews, a cornerstone of evidence-based medicine, are not produced quickly
enough to support clinical practice. The cost of production, availability of the requisite …

Tools to support the automation of systematic reviews: a scoping review

H Khalil, D Ameen, A Zarnegar - Journal of Clinical Epidemiology, 2022 - Elsevier
Objective The objectives of this scoping review are to identify the reliability and validity of the
available tools, their limitations and any recommendations to further improve the use of …

SemEval-2024 task 2: Safe biomedical natural language inference for clinical trials

M Jullien, M Valentino, A Freitas - arXiv preprint arXiv:2404.04963, 2024 - arxiv.org
Large Language Models (LLMs) are at the forefront of NLP achievements but fall short in
dealing with shortcut learning, factual inconsistency, and vulnerability to adversarial inputs …

RobotReviewer: evaluation of a system for automatically assessing bias in clinical trials

IJ Marshall, J Kuiper, BC Wallace - Journal of the American …, 2016 - academic.oup.com
Objective To develop and evaluate RobotReviewer, a machine learning (ML) system that
automatically assesses bias in clinical trials. From a (PDF-formatted) trial report, the system …

Automating data extraction in systematic reviews: a systematic review

SR Jonnalagadda, P Goyal, MD Huffman - Systematic reviews, 2015 - Springer
Background Automation of the parts of systematic review process, specifically the data
extraction step, may be an important strategy to reduce the time necessary to complete a …