Key genes regulating skeletal muscle development and growth in farm animals

M Mohammadabadi, F Bordbar, J Jensen, M Du… - Animals, 2021 - mdpi.com
Simple Summary Skeletal muscle mass is an important economic trait, and muscle
development and growth is a crucial factor to supply enough meat for human consumption …

The genetic basis of Mendelian phenotypes: discoveries, challenges, and opportunities

JX Chong, KJ Buckingham, SN Jhangiani… - The American Journal of …, 2015 - cell.com
Discovering the genetic basis of a Mendelian phenotype establishes a causal link between
genotype and phenotype, making possible carrier and population screening and direct …

Integrative functional genomic analysis of human brain development and neuropsychiatric risks

M Li, G Santpere, Y Imamura Kawasawa, OV Evgrafov… - Science, 2018 - science.org
INTRODUCTION The brain is responsible for cognition, behavior, and much of what makes
us uniquely human. The development of the brain is a highly complex process, and this …

Enhancement of the gut barrier integrity by a microbial metabolite through the Nrf2 pathway

R Singh, S Chandrashekharappa, SR Bodduluri… - Nature …, 2019 - nature.com
The importance of gut microbiota in human health and pathophysiology is undisputable.
Despite the abundance of metagenomics data, the functional dynamics of gut microbiota in …

REVEL: an ensemble method for predicting the pathogenicity of rare missense variants

NM Ioannidis, JH Rothstein, V Pejaver… - The American Journal of …, 2016 - cell.com
The vast majority of coding variants are rare, and assessment of the contribution of rare
variants to complex traits is hampered by low statistical power and limited functional data …

Predicting effective microRNA target sites in mammalian mRNAs

V Agarwal, GW Bell, JW Nam, DP Bartel - elife, 2015 - elifesciences.org
MicroRNA targets are often recognized through pairing between the miRNA seed region
and complementary sites within target mRNAs, but not all of these canonical sites are …

StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

M Pertea, GM Pertea, CM Antonescu, TC Chang… - Nature …, 2015 - nature.com
Methods used to sequence the transcriptome often produce more than 200 million short
sequences. We introduce StringTie, a computational method that applies a network flow …

Tissue-based map of the human proteome

M Uhlén, L Fagerberg, BM Hallström, C Lindskog… - Science, 2015 - science.org
INTRODUCTION Resolving the molecular details of proteome variation in the different
tissues and organs of the human body would greatly increase our knowledge of human …

A single-cell resolution map of mouse hematopoietic stem and progenitor cell differentiation

S Nestorowa, FK Hamey, B Pijuan Sala… - Blood, The Journal …, 2016 - ashpublications.org
Maintenance of the blood system requires balanced cell fate decisions by hematopoietic
stem and progenitor cells (HSPCs). Because cell fate choices are executed at the individual …

Ensembl 2017

BL Aken, P Achuthan, W Akanni… - Nucleic acids …, 2017 - academic.oup.com
Abstract Ensembl (www. ensembl. org) is a database and genome browser for enabling
research on vertebrate genomes. We import, analyse, curate and integrate a diverse …