Metal nanoparticles and pesticides under global climate change: Assessing the combined effects of multiple abiotic stressors on soil microbial ecosystems

I Fernández-Triana, O Rubilar, J Parada… - Science of The Total …, 2024 - Elsevier
The soil is a vital resource that hosts many microorganisms crucial in biogeochemical cycles
and ecosystem health. However, human activities such as the use of metal nanoparticles …

Importance of sample pre-treatments for the DNA-based characterization of microbiomes in cropland and forest soils

DR Finn, J Schroeder, MS Samad, C Poeplau… - Soil Biology and …, 2023 - Elsevier
Soil-extracted DNA is widely used to characterise the composition of microbiomes. However,
there is no commonly accepted protocol or understanding of how sample preservation and …

High-throughput DNA extraction and cost-effective miniaturized metagenome and amplicon library preparation of soil samples for DNA sequencing

TBN Jensen, SM Dall, S Knutsson, SM Karst… - Plos one, 2024 - journals.plos.org
Reductions in sequencing costs have enabled widespread use of shotgun metagenomics
and amplicon sequencing, which have drastically improved our understanding of the …

Current trends, limitations and future research in the fungi?

KD Hyde, P Baldrian, Y Chen, KW Thilini Chethana… - Fungal Diversity, 2024 - Springer
The field of mycology has grown from an underappreciated subset of botany, to a valuable,
modern scientific discipline. As this field of study has grown, there have been significant …

Improving the efficiency of DNA extraction from iron incrustations and oilfield-produced water

MJ Foysal, SJ Salgar-Chaparro - Scientific Reports, 2024 - nature.com
The quantity and quality of DNA isolated from environmental samples are crucial for getting
robust high-throughput sequencing data commonly used for microbial community analysis …

Multi-amplicon nitrogen cycling gene standard: An innovative approach for quantifying N-transforming soil microbes in terrestrial ecosystems

CJ Gillespie, TL Sit, AJ Loucanides, J Hu… - Soil Biology and …, 2024 - Elsevier
Agriculture accounts for nearly three-fourths of all nitrous oxide (N 2 O) anthropogenic
emissions, a potent greenhouse gas (GHG). Improvements in agricultural management …

[HTML][HTML] Pinpointing the distinctive impacts of ten cover crop species on the resident and active fractions of the soil microbiome

SG Cazzaniga, L Braat, S van den Elsen… - Applied Soil …, 2023 - Elsevier
Cover crops are used in agriculture to minimize soil erosion, prevent nutrient leaching and
increase soil organic matter content. Cover crops can also be grown to stimulate the soil …

A culture-independent approach, supervised machine learning, and the characterization of the microbial community composition of coastal areas across the Bay of …

BN Rekadwad, YS Shouche, K Jangid - BMC microbiology, 2024 - Springer
Background Coastal areas are subject to various anthropogenic and natural influences. In
this study, we investigated and compared the characteristics of two coastal regions, Andhra …

Responses of fungal diversity and community composition after 42 years of prescribed fire frequencies in semi-arid savanna rangelands

SB Poswa, A Manyevere… - Frontiers in Environmental …, 2024 - frontiersin.org
Prescribed fire frequencies have been widely used to reduce the risk of severe wildfire
occurrences. In addition, several studies have been conducted to assess the impact of fire …

Micro-Environmental Variation in Soil Microbial Biodiversity in Forest Frontier Ecosystems—Implications for Sustainability Assessments

VE Álvarez, VA El Mujtar, J Falcão Salles, X Jia… - Sustainability, 2024 - mdpi.com
Soil health indicators based on microbial biodiversity are increasingly used in agricultural
sustainability assessments. However, little is known about how microbial communities vary …