The microbiome of the upper respiratory tract in health and disease

C Kumpitsch, K Koskinen, V Schöpf… - BMC biology, 2019 - Springer
The human upper respiratory tract (URT) offers a variety of niches for microbial colonization.
Local microbial communities are shaped by the different characteristics of the specific …

Nasal microbiota, olfactory health, neurological disorders and aging—a review

S Thangaleela, BS Sivamaruthi, P Kesika, M Bharathi… - Microorganisms, 2022 - mdpi.com
The nasal region is one of the distinct environments for the survival of various microbiota.
The human microbial niche begins to inhabit the human body right from birth, and the …

Kombucha tea fermentation: Microbial and biochemical dynamics

S Chakravorty, S Bhattacharya, A Chatzinotas… - International journal of …, 2016 - Elsevier
Kombucha tea, a non-alcoholic beverage, is acquiring significant interest due to its claimed
beneficial properties. The microbial community of Kombucha tea consists of bacteria and …

Comparing the anterior nare bacterial community of two discrete human populations using I llumina amplicon sequencing

A Camarinha‐Silva, R Jáuregui… - Environmental …, 2014 - Wiley Online Library
The anterior nares are an important reservoir for opportunistic pathogens and commensal
microorganisms. A barcoded I llumina paired‐end sequencing method targeting the 16 S …

Commensal–pathogen interactions along the human nasal passages

SD Brugger, L Bomar, KP Lemon - PLoS pathogens, 2016 - journals.plos.org
Bacterial species that commonly reside on surfaces of the human nasal passages (Fig 1)
interact with the host along a continuum from beneficial to harmful, ie, from mutualist to …

Microbial community dynamics in replicate anaerobic digesters exposed sequentially to increasing organic loading rate, acidosis, and process recovery

X Goux, M Calusinska, S Lemaigre… - Biotechnology for …, 2015 - Springer
Background Volatile fatty acid intoxication (acidosis), a common process failure recorded in
anaerobic reactors, leads to drastic losses in methane production. Unfortunately, little is …

Dolosigranulum pigrum cooperation and competition in human nasal microbiota

SD Brugger, SM Eslami, MM Pettigrew, IF Escapa… - Msphere, 2020 - Am Soc Microbiol
Multiple epidemiological studies identify Dolosigranulum pigrum as a candidate beneficial
bacterium based on its positive association with health, including negative associations with …

Changes in cystic fibrosis airway microbial community associated with a severe decline in lung function

P Paganin, EV Fiscarelli, V Tuccio, M Chiancianesi… - PLoS …, 2015 - journals.plos.org
Cystic fibrosis (CF) is a genetic disease resulting in chronic polymicrobial infections of the
airways and progressive decline in lung function. To gain insight into the underlying causes …

Effect of model root exudate on denitrifier community dynamics and activity at different water-filled pore space levels in a fertilised soil

A Langarica-Fuentes, M Manrubia, ME Giles… - Soil Biology and …, 2018 - Elsevier
Although a “rhizosphere effect” on denitrification rates has been established, a clear
understanding of the effects of exudate addition on denitrifier community dynamics remains …

Exploring the transcriptome of Staphylococcus aureus in its natural niche

D Chaves-Moreno, ML Wos-Oxley, R Jáuregui… - Scientific reports, 2016 - nature.com
Staphylococcus aureus is an important human pathogen and commensal, where the human
nose is the predominant reservoir. To better understand its behavior in this environmental …