Co‐occurrence is not evidence of ecological interactions

FG Blanchet, K Cazelles, D Gravel - Ecology Letters, 2020 - Wiley Online Library
There is a rich amount of information in co‐occurrence (presence–absence) data that could
be used to understand community assembly. This proposition first envisioned by Forbes …

Viral co-infection in bats: A systematic review

BD Jones, EJ Kaufman, AJ Peel - Viruses, 2023 - mdpi.com
Co-infection is an underappreciated phenomenon in contemporary disease ecology despite
its ubiquity and importance in nature. Viruses, and other co-infecting agents, can interact in …

Random fields in physics, biology and data science

E Hernández-Lemus - Frontiers in Physics, 2021 - frontiersin.org
A random field is the representation of the joint probability distribution for a set of random
variables. Markov fields, in particular, have a long standing tradition as the theoretical …

Navigating the integration of biotic interactions in biogeography

W Thuiller, I Calderón‐Sanou… - Journal of …, 2024 - Wiley Online Library
Biotic interactions are widely recognised as the backbone of ecological communities, but
how best to study them is a subject of intense debate, especially at macro‐ecological scales …

Untangling direct species associations from indirect mediator species effects with graphical models

GC Popovic, DI Warton, FJ Thomson… - Methods in Ecology …, 2019 - Wiley Online Library
Ecologists often investigate co‐occurrence patterns in multi‐species data in order to gain
insight into the ecological causes of observed co‐occurrences. Apart from direct …

Synchronous shedding of multiple bat paramyxoviruses coincides with peak periods of Hendra virus spillover

AJ Peel, K Wells, J Giles, V Boyd… - Emerging microbes & …, 2019 - Taylor & Francis
Within host-parasite communities, viral co-circulation and co-infections of hosts are the
norm, yet studies of significant emerging zoonoses tend to focus on a single parasite …

Rapid winter warming could disrupt coastal marine fish community structure

NJ Clark, JT Kerry, CI Fraser - Nature Climate Change, 2020 - nature.com
Marine ecosystems are under increasing threat from warming waters. Winter warming is
occurring at a faster rate than summer warming for ecosystems around the world, but most …

Factors at multiple scales drive parasite community structure

JI Brian, DC Aldridge - Journal of Animal Ecology, 2023 - Wiley Online Library
Understanding how ecological communities are assembled remains a key goal of
ecosystem ecology. Because communities are hierarchical, factors acting at multiple scales …

An analytical review of texture feature extraction approaches

MR Keyvanpour, S Vahidian… - International Journal of …, 2021 - inderscienceonline.com
Image registration has been an essential task in computer vision and image processing.
There are many applications of image registration, for instance, in medical systems. Image …

Positive associations matter: Microbial relationships drive tick microbiome composition

NM Fountain‐Jones, BS Khoo, A Rau… - Molecular …, 2023 - Wiley Online Library
Untangling how factors such as environment, host, associations among bacterial species
and dispersal predict microbial composition is a fundamental challenge. In this study, we …