H Suzuki, M Kasahara - BMC bioinformatics, 2018 - Springer
Background The read length of single-molecule DNA sequencers is reaching 1 Mb. Popular alignment software tools widely used for analyzing such long reads often take advantage of …
In modern datacenter networks (DCNs), failures of network devices are the norm rather than the exception, and many research efforts have focused on dealing with failures after they …
A one-of-a-kind survey of the field of Reconfigurable Computing Gives a comprehensive introduction to a discipline that offers a 10X-100X acceleration of algorithms over …
A Tiskin - Mathematics in Computer Science, 2008 - Springer
Given two strings, the longest common subsequence (LCS) problem consists in computing the length of the longest string that is a subsequence of both input strings. Its generalisation …
String similarity measures are among the most fundamental problems in computer science. The notable examples are edit distance (ED) and longest common subsequence (LCS) …
A noticeable fraction of Algorithms papers in the last few decades improve the running time of well-known algorithms for fundamental problems by logarithmic factors. For example, the …
In this paper we study the fine-grained complexity of finding exact and approximate solutions to problems in P. Our main contribution is showing reductions from an exact to an …
A Abboud, A Rubinstein - 9th Innovations in Theoretical …, 2018 - drops.dagstuhl.de
Abstract The Longest Common Subsequence (LCS) is one of the most basic similarity measures and it captures important applications in bioinformatics and text analysis …
Functional Arabic Morphology is a formulation of the Arabic inflectional system seeking the working interface between morphology and syntax. ElixirFM is its high-level implementation …