Cancer epigenetics: Moving forward

A Nebbioso, FP Tambaro, C Dell'Aversana… - PLoS genetics, 2018 - journals.plos.org
Defects in chromatin modifiers and remodelers have been described both for hematological
and solid malignancies, corroborating and strengthening the role of epigenetic aberrations …

The human RNA-binding proteome and its dynamics during translational arrest

J Trendel, T Schwarzl, R Horos, A Prakash, A Bateman… - Cell, 2019 - cell.com
Proteins and RNA functionally and physically intersect in multiple biological processes,
however, currently no universal method is available to purify protein-RNA complexes. Here …

The kinetic landscape of an RNA-binding protein in cells

D Sharma, LL Zagore, MM Brister, X Ye… - Nature, 2021 - nature.com
Gene expression in higher eukaryotic cells orchestrates interactions between thousands of
RNA-binding proteins (RBPs) and tens of thousands of RNAs. The kinetics by which RBPs …

Two-dimensional nanostructures based '-onics' and '-omics' in personalized medicine

BM Francis, A Sundaram, RK Manavalan, WK Peng… - …, 2022 - degruyter.com
With the maturing techniques for advanced synthesis and engineering of two-dimensional
(2D) materials, its nanocomposites, hybrid nanostructures, alloys, and heterostructures …

Cost-effective instant air disinfection for building ventilation system by a combination of UV and micro-static electricity

Y Xie, X Zhu, P Zhang, S Wang, J Yang, J Li - Chemical Engineering …, 2023 - Elsevier
The increased threats of pathogenic bioaerosol make air disinfection in heating, ventilation,
and air conditioning (HVAC) systems crucial to occupants' health. To satisfy the high …

Ectopic expression of meiotic cohesin generates chromosome instability in cancer cell line

A Boukaba, J Liu, C Ward, Q Wu… - Proceedings of the …, 2022 - National Acad Sciences
Many tumors express meiotic genes that could potentially drive somatic chromosome
instability. While germline cohesin subunits SMC1B, STAG3, and REC8 are widely …

Mapping transcription factor occupancy using minimal numbers of cells in vitro and in vivo

L Tosti, J Ashmore, BSN Tan, B Carbone… - Genome …, 2018 - genome.cshlp.org
The identification of transcription factor (TF) binding sites in the genome is critical to
understanding gene regulatory networks (GRNs). While ChIP-seq is commonly used to …

Identification of DNA–protein binding sites by bootstrap multiple convolutional neural networks on sequence information

Y Zhang, S Qiao, S Ji, N Han, D Liu, J Zhou - Engineering Applications of …, 2019 - Elsevier
Identification of DNA–protein binding sites in protein sequence plays an essential role in a
wide variety of biological processes. In particular, there are huge volumes of protein …

Identification of whole-cell dsRNA-binding proteins by phase separation

Z Yang, J Zhou, Z Li, J Guo, L Fang, X Xiao, S Xiao - RNA biology, 2024 - Taylor & Francis
Interactions between double-stranded RNA (dsRNA) and proteins play an important role in
cellular homeostasis by regulating the editing, stability, and splicing of intracellular RNA …

Efficient recovery of the RNA-bound proteome and protein-bound transcriptome using phase separation (OOPS)

E Villanueva, T Smith, RML Queiroz, M Monti… - Nature protocols, 2020 - nature.com
RNA− protein interactions play a pivotal role in cell homeostasis and disease, but current
approaches to study them require a considerable amount of starting material, favor the …