Biological systems are by nature multiscale, consisting of subsystems that factor into
progressively smaller units in a deeply hierarchical structure. At any level of the hierarchy …

Protein–protein interaction (PPI) detection is one of the central goals of functional genomics
and systems biology. Knowledge about the nature of PPIs can help fill the widening gap …

Background Semantic similarity scores for protein pairs are widely applied in functional
genomic researches for finding functional clusters of proteins, predicting protein functions …

Many tools visualize protein-protein interaction (PPI) networks. The tool introduced here,
CellMap, adds one crucial novelty by visualizing PPI networks in the context of subcellular …

Spatiotemporal coordination is a critical factor in biological processes. Some hubs in protein–
protein interaction networks tend to be co-expressed and co-localized with their partners …

Networks of protein-protein interactions (PPIs) provide a framework for understanding
biological processes and can give insights into the mechanisms of diseases. As …

Many tools visualize protein-protein interaction (PPI) networks. The tool introduced here,
CellMap, adds one crucial novelty by visualizing PPI networks in the context of subcellular …

Understanding life on the molecular level requires knowledge about protein-protein
interactions (PPIs), but experimental data is limited and complex, rendering computational …

Over the last decade, advances achieved in genomic technologies have led to uncover vast
amount of protein-protein interaction data. Nevertheless, the existing proteinprotein …

In recent years high-throughput experiments provided a vast amount of data from all areas of
molecular biology, including genomics, transcriptomics, proteomics and metabolomics. Its …