Carbon catabolite repression in Pseudomonas: optimizing metabolic versatility and interactions with the environment

F Rojo - FEMS microbiology reviews, 2010 - academic.oup.com
Metabolically versatile free-living bacteria have global regulation systems that allow cells to
selectively assimilate a preferred compound among a mixture of several potential carbon …

Signal sensory systems that impact σ54-dependent transcription

V Shingler - FEMS microbiology reviews, 2011 - academic.oup.com
Alternative σ-factors of bacteria bind core RNA polymerase to program the specific promoter
selectivity of the holoenzyme. Signal-responsive changes in the availability of different σ …

[图书][B] Biomolecular information processing: from logic systems to smart sensors and actuators

E Katz - 2013 - books.google.com
Edited by a renowned and much cited chemist, this book covers the whole span of molecular
computers that are based on biomolecules. The contributions by all the major scientists in …

Post‐transcriptional regulation of the virulence‐associated enzyme AlgC by the σ22‐dependent small RNA ErsA of Pseudomonas aeruginosa

S Ferrara, S Carloni, R Fulco, M Falcone… - Environmental …, 2015 - Wiley Online Library
The small RNA E rs A of P seudomonas aeruginosa, transcribed from the same genomic
context of the well‐known E scherichia coli S pot 42, has been characterized. We show that …

Indirect repression by Bacillus subtilis CodY via displacement of the activator of the proline utilization operon

BR Belitsky - Journal of molecular biology, 2011 - Elsevier
Proline is an efficient source of both carbon and nitrogen for many bacterial species. In
Bacillus subtilis, the proline utilization pathway, encoded by the putBCP operon, is inducible …

Negative Autogenous Control of the Master Type III Secretion System Regulator HrpL in Pseudomonas syringae

C Waite, J Schumacher, M Jovanovic, M Bennett… - MBio, 2017 - Am Soc Microbiol
The type III secretion system (T3SS) is a principal virulence determinant of the model
bacterial plant pathogen Pseudomonas syringae. T3SS effector proteins inhibit plant …

The logicome of environmental bacteria: merging catabolic and regulatory events with Boolean formalisms

R Silva‐Rocha, J Tamames… - Environmental …, 2011 - Wiley Online Library
The regulatory and metabolic networks that rule biodegradation of pollutants by
environmental bacteria are wired to the rest of the cellular physiology through both …

The logic layout of the TOL network of Pseudomonas putida pWW0 plasmid stems from a metabolic amplifier motif (MAM) that optimizes biodegradation of m-xylene

R Silva-Rocha, H de Jong, J Tamames… - BMC Systems Biology, 2011 - Springer
Background The genetic network of the TOL plasmid pWW0 of the soil bacterium
Pseudomonas putida mt-2 for catabolism of m-xylene is an archetypal model for …

Multifaceted Interplay between Hfq and the Small RNA GssA in Pseudomonas aeruginosa

S Santoro, C Paganin, S Gilardi, T Brignoli, G Bertoni… - Mbio, 2023 - Am Soc Microbiol
Behind the pathogenic lifestyle of Pseudomonas aeruginosa exists a complex regulatory
network of intertwined switches at both the transcriptional and posttranscriptional levels …

The Small RNA ErsA Impacts the Anaerobic Metabolism of Pseudomonas aeruginosa Through Post-Transcriptional Modulation of the Master Regulator Anr

S Ferrara, R Carrubba, S Santoro… - Frontiers in Microbiology, 2021 - frontiersin.org
Pseudomonas aeruginosa is one of the most critical opportunistic pathogens in humans,
able to cause both lethal acute and chronic lung infections. In previous work, we indicated …