The biogeography of mitochondrial and nuclear discordance in animals

DPL Toews, A Brelsford - Molecular ecology, 2012 - Wiley Online Library
Combining nuclear (nuDNA) and mitochondrial DNA (mtDNA) markers has improved the
power of molecular data to test phylogenetic and phylogeographic hypotheses and has …

Consequences of hybridization in mammals: A systematic review

R Adavoudi, M Pilot - Genes, 2021 - mdpi.com
Hybridization, defined as breeding between two distinct taxonomic units, can have an
important effect on the evolutionary patterns in cross-breeding taxa. Although interspecific …

BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis

R Bouckaert, TG Vaughan… - PLoS computational …, 2019 - journals.plos.org
Elaboration of Bayesian phylogenetic inference methods has continued at pace in recent
years with major new advances in nearly all aspects of the joint modelling of evolutionary …

Ancient hybridization fuels rapid cichlid fish adaptive radiations

JI Meier, DA Marques, S Mwaiko, CE Wagner… - Nature …, 2017 - nature.com
Understanding why some evolutionary lineages generate exceptionally high species
diversity is an important goal in evolutionary biology. Haplochromine cichlid fishes of Africa's …

Incomplete lineage sorting and phenotypic evolution in marsupials

S Feng, M Bai, I Rivas-González, C Li, S Liu, Y Tong… - Cell, 2022 - cell.com
Incomplete lineage sorting (ILS) makes ancestral genetic polymorphisms persist during
rapid speciation events, inducing incongruences between gene trees and species trees. ILS …

Species-level paraphyly and polyphyly: frequency, causes, and consequences, with insights from animal mitochondrial DNA

DJ Funk, KE Omland - Annual Review of Ecology, Evolution …, 2003 - annualreviews.org
▪ Abstract Many uses of gene trees implicitly assume that nominal species are monophyletic
in their alleles at the study locus. However, in well-sampled gene trees, certain alleles in one …

Hybridization and adaptive radiation

O Seehausen - Trends in ecology & evolution, 2004 - cell.com
Whether interspecific hybridization is important as a mechanism that generates biological
diversity is a matter of controversy. Whereas some authors focus on the potential of …

Application of microsatellite markers in conservation genetics and fisheries management: recent advances in population structure analysis and conservation strategies

PM Abdul-Muneer - Genetics research international, 2014 - Wiley Online Library
Microsatellites are the most popular and versatile genetic marker with myriads of
applications in population genetics, conservation biology, and evolutionary biology. These …

African cichlid fish: a model system in adaptive radiation research

O Seehausen - Proceedings of the Royal Society B …, 2006 - royalsocietypublishing.org
The African cichlid fish radiations are the most diverse extant animal radiations and provide
a unique system to test predictions of speciation and adaptive radiation theory. The past few …

Speciation reversal and biodiversity dynamics with hybridization in changing environments

OLE Seehausen, G Takimoto, D Roy… - Molecular ecology, 2008 - Wiley Online Library
A considerable fraction of the world's biodiversity is of recent evolutionary origin and has
evolved as a by‐product of, and is maintained by, divergent adaptation in heterogeneous …