Physics-inspired structural representations for molecules and materials

F Musil, A Grisafi, AP Bartók, C Ortner… - Chemical …, 2021 - ACS Publications
The first step in the construction of a regression model or a data-driven analysis, aiming to
predict or elucidate the relationship between the atomic-scale structure of matter and its …

Machine learning force fields: Recent advances and remaining challenges

I Poltavsky, A Tkatchenko - The journal of physical chemistry …, 2021 - ACS Publications
In chemistry and physics, machine learning (ML) methods promise transformative impacts by
advancing modeling and improving our understanding of complex molecules and materials …

A comprehensive discovery platform for organophosphorus ligands for catalysis

T Gensch, G dos Passos Gomes… - Journal of the …, 2022 - ACS Publications
The design of molecular catalysts typically involves reconciling multiple conflicting property
requirements, largely relying on human intuition and local structural searches. However, the …

Representations of molecules and materials for interpolation of quantum-mechanical simulations via machine learning

MF Langer, A Goeßmann, M Rupp - npj Computational Materials, 2022 - nature.com
Computational study of molecules and materials from first principles is a cornerstone of
physics, chemistry, and materials science, but limited by the cost of accurate and precise …

Efficient implementation of atom-density representations

F Musil, M Veit, A Goscinski, G Fraux… - The Journal of …, 2021 - pubs.aip.org
Physically motivated and mathematically robust atom-centered representations of molecular
structures are key to the success of modern atomistic machine learning. They lie at the …

[HTML][HTML] Unified theory of atom-centered representations and message-passing machine-learning schemes

J Nigam, S Pozdnyakov, G Fraux… - The Journal of Chemical …, 2022 - pubs.aip.org
Data-driven schemes that associate molecular and crystal structures with their microscopic
properties share the need for a concise, effective description of the arrangement of their …

Many-body effects in aqueous systems: Synergies between interaction analysis techniques and force field development

JP Heindel, KM Herman… - Annual Review of Physical …, 2023 - annualreviews.org
Interaction analysis techniques, including the many-body expansion (MBE), symmetry-
adapted perturbation theory, and energy decomposition analysis, allow for an intuitive …

Quantum chemical roots of machine-learning molecular similarity descriptors

S Gugler, M Reiher - Journal of Chemical Theory and …, 2022 - ACS Publications
In this work, we explore the quantum chemical foundations of descriptors for molecular
similarity. Such descriptors are key for traversing chemical compound space with machine …

Improving sample and feature selection with principal covariates regression

RK Cersonsky, BA Helfrecht, EA Engel… - Machine Learning …, 2021 - iopscience.iop.org
Selecting the most relevant features and samples out of a large set of candidates is a task
that occurs very often in the context of automated data analysis, where it improves the …

Ranking the information content of distance measures

A Glielmo, C Zeni, B Cheng, G Csányi, A Laio - PNAS nexus, 2022 - academic.oup.com
Real-world data typically contain a large number of features that are often heterogeneous in
nature, relevance, and also units of measure. When assessing the similarity between data …