X Sheng, F Himo - Accounts of Chemical Research, 2023 - ACS Publications
Conspectus The quantum chemical cluster approach has been used for modeling enzyme active sites and reaction mechanisms for more than two decades. In this methodology, a …
NAMD is a molecular dynamics program designed for high-performance simulations of very large biological objects on CPU-and GPU-based architectures. NAMD offers scalable …
Polyethylene terephthalate (PET) has been widely used to make disposable bottles, among others, leading to massive PET waste accumulation in the environment. The discovery of the …
AL Dewyer, AJ Argüelles… - Wiley Interdisciplinary …, 2018 - Wiley Online Library
The area of reaction mechanism discovery simulation has taken considerable strides in recent years. Novel methods that make hypotheses for elementary steps and …
Nowadays, hybrid QM/MM approaches are widely used to study (supra) molecular systems embedded in complex biological matrices. However, in their common formulation, mutual …
The multiscaling quantum mechanics/molecular mechanics (QM/MM) approach was introduced in 1976, while the extensive acceptance of this methodology started in the 1990s …
J Zhou, M Huang - Chemical Society Reviews, 2024 - pubs.rsc.org
Global environmental issues and sustainable development call for new technologies for fine chemical synthesis and waste valorization. Biocatalysis has attracted great attention as the …
F Himo - Journal of the American Chemical Society, 2017 - ACS Publications
The quantum chemical cluster approach is a powerful method for investigating enzymatic reactions. Over the past two decades, a large number of highly diverse systems have been …
Quantum mechanics/molecular mechanics (QM/MM) hybrid models allow one to address chemical phenomena in complex molecular environments. Whereas this modeling approach …