J Koča - Progress in biophysics and molecular biology, 1998 - Elsevier
The applications of the single-co-ordinate-driving (SCD) method in conformational analysis of flexible molecules have been discussed. SCD can best be characterised as travelling …
IK Roterman, KD Gibson… - Journal of Biomolecular …, 1989 - Taylor & Francis
A search for low-energy helical and near-helical conformations of the tandemly repeated peptide (Asn-Ala-Asn-Pro) 9 was undertaken by minimization of the CHARMM potential …
The de novo prediction of the tertiary structure of peptides and proteins and, ultimately, the development of molecular switches, synthetic vaccines, pepzymes, peptidomimetics,..., are …
J Koča, Z Kříž, PHJ Carlsen - Journal of Molecular Structure: Theochem, 1994 - Elsevier
Conformational potential energy hypersurfaces (PES) for the N-acetyl-N'-methylamides of all the 20 common amino acids have been analyzed by means of the molecular mechanics …
S Wolfe, K Yang, M Khalil - Canadian Journal of Chemistry, 1988 - cdnsciencepub.com
Using the MMPEN parameters of Allinger's MMP2 (85) force field, a conformational analysis has been performed on four biologically active penicillins; d-ampicillin, l-α …
S Wolfe, M Khalil, DF Weaver - Canadian Journal of Chemistry, 1988 - cdnsciencepub.com
A set of parameters, termed MMPEN, has been determined for the bicyclic nucleus of penicillin, which, in conjunction with the appropriate parameters from MMPEP and the …
Z Křı́ž, PHJ Carlsen, J Koča - Journal of Molecular Structure: THEOCHEM, 2001 - Elsevier
A theoretical conformational study using the CICADA program package (J. Mol. Struct.(Theochem), 337 (1995) 17) was performed for two linear enkephalins, Leu …
V Barone, F Fraternali, PL Cristinziano - Macromolecules, 1990 - ACS Publications
The conformational behavior of-aminoisobutyric acid has been investigated by means of ab initio and empirical methods. Empirical computations performed with fixed bond lengths and …
S Feng, X Zheng, D Wang, Y Gong… - The Journal of …, 2014 - ACS Publications
Glutathione (GSH) is the most abundant tripeptide in human cells and plays an important role in protecting cells' integrity against oxidative stress. GSH has an unusual amide linkage …