Three-dimensional electron microscopy (3DEM) is an imaging field containing several
powerful modalities such as serial section transmission electron microscopy and electron …

Investigating organelles such as the Golgi complex depends increasingly on high-
throughput quantitative morphological analyses from multiple experimental or genetic …

Segmentation of biological volumes is a crucial step needed to fully analyse their scientific
content. Not having access to convenient tools with which to segment or annotate the data …

Recent advances in electron microscopy have enabled the imaging of single cells in 3D at
nanometer length scale resolutions. An uncharted frontier for in silico biology is the ability to …

This paper investigates the impact of the amount of training data and the shape variability on
the segmentation provided by the deep learning architecture U-Net. Further, the correctness …

Serial block face scanning electron microscopy (SBF‐SEM) is a relatively new technique
that allows the acquisition of serially sectioned, imaged and digitally aligned ultrastructural …

Although acknowledged to be variable and subjective, manual annotation of cryo-electron
tomography data is commonly used to answer structural questions and to create a “ground …

Background Substrate accessibility to catalysts has been a dominant theme in theories of
biomass deconstruction. However, current methods of quantifying accessibility do not …

Segmentation of scanning electron microscopy (SEM) images of focused ion beam (FIB)
cross-sections through indented regions in nanoporous gold (np-Au) is carried out. A key …

Segmentation is the process of isolating specific regions or objects within an imaged
volume, so that further study can be undertaken on these areas of interest. When …