Mechanical processes in biochemistry

C Bustamante, YR Chemla, NR Forde… - Annual review of …, 2004 - annualreviews.org
▪ Abstract Mechanical processes are involved in nearly every facet of the cell cycle.
Mechanical forces are generated in the cell during processes as diverse as chromosomal …

Single-molecule experiments in vitro and in silico

M Sotomayor, K Schulten - Science, 2007 - science.org
Single-molecule force experiments in vitro enable the characterization of the mechanical
response of biological matter at the nanometer scale. However, they do not reveal the …

Single reconstituted neuronal SNARE complexes zipper in three distinct stages

Y Gao, S Zorman, G Gundersen, Z Xi, L Ma, G Sirinakis… - Science, 2012 - science.org
Soluble N-ethylmaleimide–sensitive factor attachment protein receptor (SNARE) proteins
drive membrane fusion by assembling into a four-helix bundle in a zippering process. Here …

[HTML][HTML] Kinetics from nonequilibrium single-molecule pulling experiments

G Hummer, A Szabo - Biophysical journal, 2003 - cell.com
Mechanical forces exerted by laser tweezers or atomic force microscopes can be used to
drive rare transitions in single molecules, such as unfolding of a protein or dissociation of a …

Genetic variation in titin in arrhythmogenic right ventricular cardiomyopathy–overlap syndromes

M Taylor, S Graw, G Sinagra, C Barnes, D Slavov… - Circulation, 2011 - Am Heart Assoc
Background—Arrhythmogenic right ventricular cardiomyopathy (ARVC) is an inherited
genetic myocardial disease characterized by fibrofatty replacement of the myocardium and a …

Mechanotransduction involving multimodular proteins: converting force into biochemical signals

V Vogel - Annu. Rev. Biophys. Biomol. Struct., 2006 - annualreviews.org
Cells can sense and transduce a broad range of mechanical forces into distinct sets of
biochemical signals that ultimately regulate cellular processes, including adhesion …

Discovery through the computational microscope

EH Lee, J Hsin, M Sotomayor, G Comellas, K Schulten - Structure, 2009 - cell.com
All-atom molecular dynamics simulations have become increasingly popular as a tool to
investigate protein function and dynamics. However, researchers are concerned about the …

High-speed force spectroscopy unfolds titin at the velocity of molecular dynamics simulations

F Rico, L Gonzalez, I Casuso, M Puig-Vidal… - Science, 2013 - science.org
The mechanical unfolding of the muscle protein titin by atomic force microscopy was a
landmark in our understanding of single-biomolecule mechanics. Molecular dynamics …

The present view of the mechanism of protein folding

V Daggett, A Fersht - Nature Reviews Molecular Cell Biology, 2003 - nature.com
We can track the positions and movements of all the atoms in small proteins as they fold and
unfold by combining experimental studies with atomic-resolution molecular dynamics …

Pulling geometry defines the mechanical resistance of a β-sheet protein

DJ Brockwell, E Paci, RC Zinober… - Nature Structural & …, 2003 - nature.com
Proteins show diverse responses when placed under mechanical stress. The molecular
origins of their differing mechanical resistance are still unclear, although the orientation of …