High-throughput screening of the ReFRAME, Pandemic Box, and COVID Box drug repurposing libraries against SARS-CoV-2 nsp15 endoribonuclease to identify …

R Choi, M Zhou, R Shek, JW Wilson, L Tillery… - PLoS …, 2021 - journals.plos.org
SARS-CoV-2 has caused a global pandemic, and has taken over 1.7 million lives as of mid-
December, 2020. Although great progress has been made in the development of effective …

Assessing parallel heterogeneous computer architectures for multiobjective feature selection on EEG classification

JJ Escobar, J Ortega, J González, M Damas - … and Biomedical Engineering …, 2016 - Springer
High-dimensional multi-objective optimization will open promising approaches to many
applications on bioinformatics once efficient parallel procedures are available. These …

Optimization of data assignment for parallel processing in a hybrid heterogeneous environment using integer linear programming

T Boiński, P Czarnul - The Computer Journal, 2022 - academic.oup.com
In the paper we investigate a practical approach to application of integer linear programming
for optimization of data assignment to compute units in a multi-level heterogeneous …

Performance-aware scheduling of multicore time-critical systems

J Boudjadar, JH Kim… - 2016 ACM/IEEE …, 2016 - ieeexplore.ieee.org
Despite attractiveness of multicore processors for embedded systems, the potential
performance gains need to be studied in the context of real-time task scheduling and …

Parallel and efficient sensitivity analysis of microscopy image segmentation workflows in hybrid systems

W Barreiros, G Teodoro, T Kurc, J Kong… - 2017 IEEE …, 2017 - ieeexplore.ieee.org
We investigate efficient sensitivity analysis (SA) of algorithms that segment and classify
image features in a large dataset of high-resolution images. Algorithm SA is the process of …

CPU implementation using only logisim simulator to achieve computer architecture learning outcome

MHH Ichsan, W Kurniawan - Bulletin of Electrical Engineering and …, 2020 - beei.org
This paper proposes the design, implementation, and evaluation of an 8-bit CPU
architecture in computer organization and architecture (COA) course for Undergraduate …

An efficient energy-driven scheduling of dvfs-multicore systems with a hierarchy of shared memories

J Boudjadar - 2017 IEEE/ACM 21st International Symposium on …, 2017 - ieeexplore.ieee.org
Nowadays, multicore platforms are being widely used for the deployment of embedded
systems due to their potential in terms of processing capacity. However, the resulting …

Optimizing parameter sensitivity analysis of large‐scale microscopy image analysis workflows with multilevel computation reuse

W Barreiros Jr, J Moreira, T Kurc, J Kong… - Concurrency and …, 2020 - Wiley Online Library
Parameter sensitivity analysis (SA) is an effective tool to gain knowledge about complex
analysis applications and assess the variability in their analysis results. However, it is an …

Classification framework for the parallel hash join with a performance analysis on the GPU

KA Wozniak, E Schikuta - 2017 IEEE International Symposium …, 2017 - ieeexplore.ieee.org
The hash join operator is one of the most important relational operators in database
applications and a prominent research topic in the domain of parallel processing. However …

Kepler GPU vs. Xeon Phi: Performance case study with a high-order CFD application

L Deng, H Bai, D Zhao, F Wang - 2015 IEEE international …, 2015 - ieeexplore.ieee.org
This paper focuses on the performance aspects of two types of many-core architectures,
Tesla K20c GPU and Xeon Phi 31SP coprocessor, in solving complicated flow structures …