Salt stress under the scalpel–dissecting the genetics of salt tolerance

MJL Morton, M Awlia, N Al‐Tamimi, S Saade… - The Plant …, 2019 - Wiley Online Library
Salt stress limits the productivity of crops grown under saline conditions, leading to
substantial losses of yield in saline soils and under brackish and saline irrigation. Salt …

[HTML][HTML] Invited review: Advances and applications of random regression models: From quantitative genetics to genomics

HR Oliveira, LF Brito, DAL Lourenco, FF Silva… - Journal of dairy …, 2019 - Elsevier
An important goal in animal breeding is to improve longitudinal traits; that is, traits recorded
multiple times during an individual's lifetime or physiological cycle. Longitudinal traits were …

[HTML][HTML] Genome-wide association study on milk production and somatic cell score for Thai dairy cattle using weighted single-step approach with random regression …

S Buaban, K Lengnudum, W Boonkum… - Journal of Dairy …, 2022 - Elsevier
ABSTRACTS Genome-wide association studies are a powerful tool to identify genomic
regions and variants associated with phenotypes. However, only limited mutual confirmation …

Weighted single-step GWAS and gene network analysis reveal new candidate genes for semen traits in pigs

DBD Marques, JWM Bastiaansen… - Genetics Selection …, 2018 - Springer
Background In recent years, there has been increased interest in the study of the molecular
processes that affect semen traits. In this study, our aim was to identify quantitative trait loci …

Genetic diversity and population structure of six autochthonous pig breeds from Croatia, Serbia, and Slovenia

M Zorc, D Škorput, K Gvozdanović, P Margeta… - Genetics selection …, 2022 - Springer
Background The importance of local breeds as genetic reservoirs of valuable genetic
variation is well established. Pig breeding in Central and South-Eastern Europe has a long …

Weighted single-step GWAS identified candidate genes associated with growth traits in a Duroc pig population

D Ruan, Z Zhuang, R Ding, Y Qiu, S Zhou, J Wu, C Xu… - Genes, 2021 - mdpi.com
Growth traits are important economic traits of pigs that are controlled by several major genes
and multiple minor genes. To better understand the genetic architecture of growth traits, we …

Similar genetic architecture with shared and unique quantitative trait loci for bacterial cold water disease resistance in two rainbow trout breeding populations

RL Vallejo, S Liu, G Gao, BO Fragomeni… - Frontiers in …, 2017 - frontiersin.org
Bacterial cold water disease (BCWD) causes significant mortality and economic losses in
salmonid aquaculture. In previous studies, we identified moderate-large effect quantitative …

Predicting growth and carcass traits in swine using microbiome data and machine learning algorithms

C Maltecca, D Lu, C Schillebeeckx, NP McNulty… - Scientific reports, 2019 - nature.com
In this paper, we evaluated the power of microbiome measures taken at three time points
over the growth test period (weaning, 15 and 22 weeks) to foretell growth and carcass traits …

[HTML][HTML] Single step genome-wide association studies based on genotyping by sequence data reveals novel loci for the litter traits of domestic pigs

P Wu, Q Yang, K Wang, J Zhou, J Ma, Q Tang, L Jin… - Genomics, 2018 - Elsevier
In this study, data genotyping by sequence (GBS) was used to perform single step GWAS
(ssGWAS) to identify SNPs associated with the litter traits in domestic pigs and search for …

Genome-wide association analysis and accuracy of genome-enabled breeding value predictions for resistance to infectious hematopoietic necrosis virus in a …

RL Vallejo, H Cheng, BO Fragomeni… - Genetics Selection …, 2019 - Springer
Background Infectious hematopoietic necrosis (IHN) is a disease of salmonid fish that is
caused by the IHN virus (IHNV). Under intensive aquaculture conditions, IHNV can cause …