Developmental and evolutionary diversity of plant MADS-domain factors: insights from recent studies

C Smaczniak, RGH Immink, GC Angenent… - …, 2012 - journals.biologists.com
Members of the MADS-box transcription factor family play essential roles in almost every
developmental process in plants. Many MADS-box genes have conserved functions across …

Flowering time control and applications in plant breeding

C Jung, AE Müller - Trends in plant science, 2009 - cell.com
Shifting the seasonal timing of reproduction is a major goal of plant breeding efforts to
produce novel varieties that are better adapted to local environments and changing climatic …

Chromosome-scale assemblies of plant genomes using nanopore long reads and optical maps

C Belser, B Istace, E Denis, M Dubarry, FC Baurens… - Nature plants, 2018 - nature.com
Plant genomes are often characterized by a high level of repetitiveness and polyploid
nature. Consequently, creating genome assemblies for plant genomes is challenging. The …

The pangenome of an agronomically important crop plant Brassica oleracea

AA Golicz, PE Bayer, GC Barker, PP Edger… - Nature …, 2016 - nature.com
There is an increasing awareness that as a result of structural variation, a reference
sequence representing a genome of a single individual is unable to capture all of the gene …

The high‐quality genome of Brassica napus cultivar 'ZS11' reveals the introgression history in semi‐winter morphotype

F Sun, G Fan, Q Hu, Y Zhou, M Guan, C Tong… - The Plant …, 2017 - Wiley Online Library
Allotetraploid oilseed rape (Brassica napus L.) is an agriculturally important crop. Cultivation
and breeding of B. napus by humans has resulted in numerous genetically diverse …

Understanding mechanisms of novel gene expression in polyploids

TC Osborn, JC Pires, JA Birchler, DL Auger, ZJ Chen… - Trends in genetics, 2003 - cell.com
Polyploidy has long been recognized as a prominent force shaping the evolution of
eukaryotes, especially flowering plants. New phenotypes often arise with polyploid formation …

NATURALLY OCCURRING GENETIC VARIATION IN ARABIDOPSIS THALIANA

M Koornneef, C Alonso-Blanco… - Annu. Rev. Plant …, 2004 - annualreviews.org
▪ Abstract Currently, genetic variation is probably the most important basic resource for plant
biology. In addition to the variation artificially generated by mutants in model plants, naturally …

Genomic Changes in Resynthesized Brassica napus and Their Effect on Gene Expression and Phenotype

RT Gaeta, JC Pires, F Iniguez-Luy, E Leon… - The Plant …, 2007 - academic.oup.com
Many previous studies have provided evidence for genome changes in polyploids, but there
are little data on the overall population dynamics of genome change and whether it causes …

What has natural variation taught us about plant development, physiology, and adaptation?

C Alonso-Blanco, MGM Aarts, L Bentsink… - The Plant …, 2009 - academic.oup.com
Nearly 100 genes and functional polymorphisms underlying natural variation in plant
development and physiology have been identified. In crop plants, these include genes …

The ABC's of comparative genomics in the Brassicaceae: building blocks of crucifer genomes

ME Schranz, MA Lysak, T Mitchell-Olds - Trends in plant science, 2006 - cell.com
In this review we summarize recent advances in our understanding of phylogenetics,
polyploidization and comparative genomics in the family Brassicaceae. These findings pave …