Predicting immunogenic tumour mutations by combining mass spectrometry and exome sequencing

M Yadav, S Jhunjhunwala, QT Phung, P Lupardus… - Nature, 2014 - nature.com
Human tumours typically harbour a remarkable number of somatic mutations. If presented
on major histocompatibility complex class I molecules (MHCI), peptides containing these …

Structural and kinetic basis for heightened immunogenicity of T cell vaccines

JL Chen, G Stewart-Jones, G Bossi, NM Lissin… - The Journal of …, 2005 - rupress.org
Analogue peptides with enhanced binding affinity to major histocompatibility class (MHC) I
molecules are currently being used in cancer patients to elicit stronger T cell responses …

CD8+ T cell activation is governed by TCR-peptide/MHC affinity, not dissociation rate

S Tian, R Maile, EJ Collins… - The Journal of Immunology, 2007 - journals.aai.org
Binding of peptide/MHC (pMHC) complexes by TCR initiates T cell activation. Despite long
interest, the exact relationship between the biochemistry of TCR/pMHC interaction …

Design of Agonistic Altered Peptides for the Robust Induction of CTL Directed towards H-2Db in Complex with the Melanoma-Associated Epitope gp100

MJB van Stipdonk, D Badia-Martinez, M Sluijter… - Cancer research, 2009 - AACR
Immunogenicity of tumor-associated antigens (TAA) is often weak because many TAA are
autoantigens for which the T-cell repertoire is sculpted by tolerance mechanisms …

Interplay between TCR affinity and necessity of coreceptor ligation: high-affinity peptide-MHC/TCR interaction overcomes lack of CD8 engagement

SE Kerry, J Buslepp, LA Cramer, R Maile… - The Journal of …, 2003 - journals.aai.org
CD8 engagement is believed to be a critical event in the activation of naive T cells. In this
communication, we address the effects of peptide-MHC (pMHC)/TCR affinity on the …

Peripheral “CD8 tuning” dynamically modulates the size and responsiveness of an antigen-specific T cell pool in vivo

R Maile, CA Siler, SE Kerry, KE Midkiff… - The Journal of …, 2005 - journals.aai.org
In this study, we suggest that CD8 levels on T cells are not static, but can change and, as a
result, modulate CD8+ T cell responses. We describe three models of CD8 modulation using …

Determination of structural principles underlying three different modes of lymphocytic choriomeningitis virus escape from CTL recognition

LM Velloso, J Michaëlsson, HG Ljunggren… - The Journal of …, 2004 - journals.aai.org
Lymphocytic choriomeningitis virus infection of H-2 b mice generates a strong CD8+ CTL
response mainly directed toward three immunodominant epitopes, one of which, gp33, is …

Fluorescent target array killing assay: A multiplex cytotoxic T‐cell assay to measure detailed T‐cell antigen specificity and avidity in vivo

BJC Quah, DK Wijesundara, C Ranasinghe… - Cytometry Part …, 2012 - Wiley Online Library
Here we describe a multiplex, fluorescence‐based, in vivo cytotoxic T‐cell assay using the
three vital dyes carboxyfluorescein diacetate succinimidyl ester, cell trace violet, and cell …

Mathematical modeling of T-cell activation kinetic

C Bidot, F Gruy, CS Haudin, F El Hentati… - Journal of …, 2008 - liebertpub.com
T-cell activation is a crucial step in mounting of the immune response. The dynamics of T-
cell receptor (TCR) specific recognition of peptide presented by major histocompatibility …

Expression and alternative splicing of classical and nonclassical MHCI genes in the hippocampus and neuromuscular junction

MM Tetruashvily, JW Melson, JJ Park, X Peng… - Molecular and Cellular …, 2016 - Elsevier
The major histocompatibility complex class I (MHCI) is a large gene family, with over 20
members in mouse. Some MHCIs are well-known for their critical roles in the immune …