[HTML][HTML] Interactome networks and human disease

M Vidal, ME Cusick, AL Barabási - Cell, 2011 - cell.com
Complex biological systems and cellular networks may underlie most genotype to
phenotype relationships. Here, we review basic concepts in network biology, discussing …

Methods for biological data integration: perspectives and challenges

V Gligorijević, N Pržulj - Journal of the Royal Society …, 2015 - royalsocietypublishing.org
Rapid technological advances have led to the production of different types of biological data
and enabled construction of complex networks with various types of interactions between …

Alteration of the cutaneous microbiome in psoriasis and potential role in Th17 polarization

HW Chang, D Yan, R Singh, J Liu, X Lu, D Ucmak… - Microbiome, 2018 - Springer
Abstract Background Psoriasis impacts 1–3% of the world's population and is characterized
by hyper-proliferation of keratinocytes and increased inflammation. At the molecular level …

Regulation of RNA granule dynamics by phosphorylation of serine-rich, intrinsically disordered proteins in C. elegans

JT Wang, J Smith, BC Chen, H Schmidt, D Rasoloson… - Elife, 2014 - elifesciences.org
RNA granules have been likened to liquid droplets whose dynamics depend on the
controlled dissolution and condensation of internal components. The molecules and …

Integrative Analysis of the Caenorhabditis elegans Genome by the modENCODE Project

MB Gerstein, ZJ Lu, EL Van Nostrand, C Cheng… - Science, 2010 - science.org
We systematically generated large-scale data sets to improve genome annotation for the
nematode Caenorhabditis elegans, a key model organism. These data sets include …

Fundamentals of protein interaction network mapping

J Snider, M Kotlyar, P Saraon, Z Yao… - Molecular systems …, 2015 - embopress.org
Studying protein interaction networks of all proteins in an organism (“interactomes”) remains
one of the major challenges in modern biomedicine. Such information is crucial to …

[HTML][HTML] Evidence for network evolution in an Arabidopsis interactome map

Arabidopsis Interactome Mapping … - Science (New York …, 2011 - ncbi.nlm.nih.gov
Plants have unique features that evolved in response to their environments and ecosystems.
A full account of the complex cellular networks that underlie plant-specific functions is still …

[HTML][HTML] CTCF and cohesin: linking gene regulatory elements with their targets

M Merkenschlager, DT Odom - Cell, 2013 - cell.com
Current epigenomics approaches have facilitated the genome-wide identification of
regulatory elements based on chromatin features and transcriptional regulator binding and …

History of protein–protein interactions: From egg‐white to complex networks

P Braun, AC Gingras - Proteomics, 2012 - Wiley Online Library
Today, it is widely appreciated that protein–protein interactions play a fundamental role in
biological processes. This was not always the case. The study of protein interactions started …

Bimolecular fluorescence complementation (BiFC): a 5-year update and future perspectives

Y Kodama, CD Hu - Biotechniques, 2012 - Taylor & Francis
Over the past decade, bimolecular fluorescence complementation (BiFC) has emerged as a
key technique to visualize protein-protein interactions in a variety of model organisms. The …