Fluorescent analogs of biomolecular building blocks: design, properties, and applications

RW Sinkeldam, NJ Greco, Y Tor - Chemical reviews, 2010 - ACS Publications
Fluorescence spectroscopy, one of the most informative and sensitive analytical techniques,
has played and continues to play key roles in modern research. Indeed, unraveling the inner …

Fluorescent nucleic acid base analogues

LM Wilhelmsson - Quarterly reviews of biophysics, 2010 - cambridge.org
The use of fluorescent nucleic acid base analogues is becoming increasingly important in
the fields of biology, biochemistry and biophysical chemistry as well as in the field of DNA …

Probing of nucleic acid structures, dynamics, and interactions with environment-sensitive fluorescent labels

BY Michel, D Dziuba, R Benhida… - Frontiers in …, 2020 - frontiersin.org
Fluorescence labeling and probing are fundamental techniques for nucleic acid analysis
and quantification. However, new fluorescent probes and approaches are urgently needed …

Emissive RNA alphabet

D Shin, RW Sinkeldam, Y Tor - Journal of the American Chemical …, 2011 - ACS Publications
A fluorescent ribonucleoside alphabet consisting of highly emissive purine (th A, th G) and
pyrimidine (th U, th C) analogues, all derived from thieno [3, 4-d] pyrimidine as the …

Fluorescent nucleoside analogs: probes for investigating nucleic acid structure and function

AA Tanpure, MG Pawar… - Israel Journal of …, 2013 - Wiley Online Library
Base‐modified fluorescent nucleoside analog probes have been very valuable in the study
of nucleic acid structure and function. Many of them structurally resemble natural bases, and …

Intrinsically fluorescent base-discriminating nucleoside analogs

DW Dodd, RHE Hudson - Mini-Reviews in Organic Chemistry, 2009 - ingentaconnect.com
Modified nucleosides possessing intrinsically fluorescent heterocycles as base surrogates
that are capable of canonical basepairing are becoming important biomolecular tools. These …

Pd (0)/Cu (I)-mediated direct arylation of 2′-deoxyadenosines: Mechanistic role of Cu (I) and reactivity comparisons with related purine nucleosides

TE Storr, CG Baumann, RJ Thatcher… - The Journal of …, 2009 - ACS Publications
Pd/Cu-mediated direct arylation of 2′-deoxyadenosine with various aryl iodides provides 8-
arylated 2′-deoxyadenosine derivatives in good yields. Following significant reaction …

Synthesis and photophysical properties of biaryl-substituted nucleos (t) ides. Polymerase synthesis of DNA probes bearing solvatochromic and pH-sensitive dual …

J Riedl, R Pohl, L Rulíšek… - The Journal of organic …, 2012 - ACS Publications
The design of four new fluorinated biaryl fluorescent labels and their attachment to
nucleosides and nucleoside triphosphates (dNTPs) by the aqueous cross-coupling …

Highly fluorescent guanosine mimics for folding and energy transfer studies

A Dumas, NW Luedtke - Nucleic acids research, 2011 - academic.oup.com
Guanosines with substituents at the 8-position can provide useful fluorescent probes that
effectively mimic guanine residues even in highly demanding model systems such as …

FRET enabled real time detection of RNA-small molecule binding

Y Xie, AV Dix, Y Tor - Journal of the American Chemical Society, 2009 - ACS Publications
A robust analysis and discovery platform for antibiotics targeting the bacterial rRNA A-site
has been developed by incorporating a new emissive U surrogate into the RNA and labeling …