String covering: A survey

N Mhaskar, WF Smyth - Fundamenta Informaticae, 2023 - fi.episciences.org
The study of strings is an important combinatorial field that precedes the digital computer.
Strings can be very long, trillions of letters, so it is important to find compact representations …

[HTML][HTML] Inferring an indeterminate string from a prefix graph

A Alatabbi, MS Rahman, WF Smyth - Journal of Discrete Algorithms, 2015 - Elsevier
An indeterminate string (or, more simply, just a string) x= x [1.. n] on an alphabet Σ is a
sequence of nonempty subsets of Σ. We say that x [i 1] and x [i 2] match (written x [i 1]≈ x [i …

Universal reconstruction of a string

P Gawrychowski, T Kociumaka, J Radoszewski… - Algorithms and Data …, 2015 - Springer
Many properties of a string can be viewed as sets of dependencies between substrings of
the string expressed in terms of substring equality. We design a linear-time algorithm which …

Inferring strings from cover arrays

TM Moosa, S Nazeen, MS Rahman… - Discrete Mathematics …, 2013 - World Scientific
Covers, being one of the most popular form of regularities in strings, have drawn much
attention in the relevant literature. In this paper, we focus on the problem of linear-time …

[PDF][PDF] Advances in stringology and applications

A Alatabbi - 2014 - kclpure.kcl.ac.uk
Written text is considered as one of the oldest methods to represent knowledge. A text can
be defined as a logical and consistent sequence of symbols which encodes information in a …

[PDF][PDF] Degenerate String Reconstruction from Cover Arrays.

DR Baisya, MM Faysal, MS Rahman - Stringology, 2013 - stringology.org
Regularities in degenerate strings have recently been a matter of interest because of their
use in the fields of molecular biology, musical text analysis, cryptanalysis and so on. In this …