The origin and molecular epidemiology of HIV

M Peeters, M Jung, A Ayouba - Expert review of anti-infective …, 2013 - Taylor & Francis
HIV-1 in humans resulted from at least four cross-species transmissions of simian
immunodeficiency viruses (SIVs) from chimpanzees and gorillas in West Central Africa …

[HTML][HTML] The increasing prevalence of HIV-1 subtype C in Southern Brazil and its dispersion through the continent

T Gräf, AR Pinto - Virology, 2013 - Elsevier
The HIV-1 has evolved swiftly and the scenario of HIV-1 genetic diversity is constantly
changing. In South America, recombinant forms of subtypes B, F1, and BF1 have historically …

Molecular epidemiology of HIV-1 subtypes in India: origin and evolutionary history of the predominant subtype C

U Neogi, I Bontell, A Shet, A De Costa, S Gupta… - PloS one, 2012 - journals.plos.org
Background India has the third largest HIV-1 epidemic with 2.4 million infected individuals.
Molecular epidemiological analysis has identified the predominance of HIV-1 subtype C …

Identification of a HIV-1 circulating BF1 recombinant form (CRF75_BF1) of Brazilian origin that also circulates in Southwestern Europe

J Bacqué, E Delgado, H Gil, S Ibarra, S Benito… - Frontiers in …, 2023 - frontiersin.org
Introduction The high recombinogenic potential of HIV-1 has resulted in the generation of
countless unique recombinant forms (URFs) and around 120 reported circulating …

Evolutionary dynamics of HIV-1 subtype C in Brazil

B Souto, V Triunfante, A Santos-Pereira, J Martins… - Scientific reports, 2021 - nature.com
The extensive genetic diversity of HIV-1 is a major challenge for the prevention and
treatment of HIV-1 infections. Subtype C accounts for most of the HIV-1 infections in the …

History and origin of the HIV-1 subtype C epidemic in South Africa and the greater southern African region

E Wilkinson, S Engelbrecht, T De Oliveira - Scientific reports, 2015 - nature.com
HIV has spread at an alarming rate in South Africa, making it the country with the highest
number of HIV infections. Several studies have investigated the histories of HIV-1 subtype C …

Contribution of epidemiological predictors in unraveling the phylogeographic history of HIV-1 subtype C in Brazil

T Gräf, B Vrancken, D Maletich Junqueira… - Journal of …, 2015 - Am Soc Microbiol
The phylogeographic history of the Brazilian HIV-1 subtype C (HIV-1C) epidemic is still
unclear. Previous studies have mainly focused on the capital cities of Brazilian federal …

Identification of CRF89_BF, a new member of an HIV-1 circulating BF intersubtype recombinant form family widely spread in South America

E Delgado, A Fernández-García, M Pérez-Losada… - Scientific Reports, 2021 - nature.com
Circulating recombinant forms (CRFs) contribute substantially to the HIV-1 pandemic.
Among 105 CRFs described in the literature, 16 are BF intersubtype recombinants, most of …

Comprehensive characterization of HIV-1 molecular epidemiology and demographic history in the Brazilian region most heavily affected by AIDS

T Gräf, H Machado Fritsch, RM de Medeiros… - Journal of …, 2016 - Am Soc Microbiol
The high incidence of AIDS cases and the dominance of HIV-1 subtype C infections are two
features that distinguish the HIV-1 epidemic in the two southernmost Brazilian states (Rio …

High-resolution deep sequencing reveals biodiversity, population structure, and persistence of HIV-1 quasispecies within host ecosystems

L Yin, L Liu, Y Sun, W Hou, AC Lowe, BP Gardner… - Retrovirology, 2012 - Springer
Background Deep sequencing provides the basis for analysis of biodiversity of
taxonomically similar organisms in an environment. While extensively applied to microbiome …