Intracellular life cycle kinetics of SARS-CoV-2 predicted using mathematical modelling

D Grebennikov, E Kholodareva, I Sazonov… - Viruses, 2021 - mdpi.com
SARS-CoV-2 infection represents a global threat to human health. Various approaches were
employed to reveal the pathogenetic mechanisms of COVID-19. Mathematical and …

Comparing antiviral strategies against COVID-19 via multiscale within-host modelling

F Fatehi, RJ Bingham, EC Dykeman… - Royal Society …, 2021 - royalsocietypublishing.org
Within-host models of COVID-19 infection dynamics enable the merits of different forms of
antiviral therapy to be assessed in individual patients. A stochastic agent-based model of …

An age-structured model of hepatitis B viral infection highlights the potential of different therapeutic strategies

F Fatehi, RJ Bingham, PG Stockley, R Twarock - Scientific Reports, 2022 - nature.com
Hepatitis B virus (HBV) is a global health threat, and its elimination by 2030 has been
prioritised by the World Health Organisation. Here we present an age-structured model for …

A computational spatial whole-Cell model for hepatitis B viral infection and drug interactions

Z Ghaemi, O Nafiu, E Tajkhorshid, M Gruebele, J Hu - Scientific reports, 2023 - nature.com
Despite a vaccine, hepatitis B virus (HBV) remains a world-wide source of infections and
deaths. We develop a whole-cell computational platform combining spatial and kinetic …

Re-cycling of DNA-containing Capsids Enhances Hepatitis B Virus Infection

R Sutradhar, DC Dalal - arXiv preprint arXiv:2309.15665, 2023 - arxiv.org
Hepatitis B virus infection is a deadly liver disease. A part of newly produced HBV DNA-
containing capsids are reused as a core particle in HBV replication. It is investigated that the …

In vitro functional analysis of gRNA sites regulating assembly of hepatitis B virus

N Patel, S Clark, EU Weiß, CP Mata, J Bohon… - Communications …, 2021 - nature.com
The roles of RNA sequence/structure motifs, Packaging Signals (PSs), for regulating
assembly of an HBV genome transcript have been investigated in an efficient in vitro assay …

Intracellular Dynamics of Hepatitis B Virus Infection: A Mathematical Model and Global Sensitivity Analysis of Its Parameters

R Sutradhar, DC Dalal - arXiv preprint arXiv:2307.02835, 2023 - arxiv.org
Analysis of cell population can reveal the average information about the viral infection in
host whereas single-cell analysis can capture the individual consideration. Single-cell …

Cytoplasmic recycling of rcDNA-containing capsids enhances HBV infection

R Sutradhar, DC Dalal - Nonlinear Dynamics, 2024 - Springer
Hepatitis B virus (HBV) infection is a deadly liver disease. The main aim of this work is to
explore the role of cytoplasmic recycling of rcDNA-containing capsids in the hepatitis B virus …

A Semi‐mechanistic Model to Characterize the Long‐Term Dynamics of Hepatitis B Virus Markers During Treatment With Lamivudine and Pegylated Interferon

S El Messaoudi, A Lemenuel‐Diot… - Clinical …, 2023 - Wiley Online Library
Antiviral treatments against hepatitis B virus (HBV) suppress viral replication but do not
eradicate the virus, and need therefore to be taken lifelong to avoid relapse. Mathematical …

[HTML][HTML] Dysregulation of hepatitis B virus nucleocapsid assembly in vitro by RNA-binding small ligands

N Patel, F Abulwerdi, F Fatehi, IW Manfield… - Journal of molecular …, 2022 - Elsevier
RNA sequences/motifs dispersed across the genome of Hepatitis B Virus regulate formation
of nucleocapsid-like particles (NCPs) by core protein (Cp) in vitro, in an epsilon/polymerase …