A comparative and functional genomics analysis of the genus Romboutsia provides insight into adaptation to an intestinal lifestyle

J Gerritsen, B Hornung, J Ritari, L Paulin, GT Rijkers… - BioRxiv, 2019 - biorxiv.org
Cultivation-independent surveys have shown that the recently described genus Romboutsia
within the family Peptostreptococcaceae is more diverse than previously acknowledged. The …

[HTML][HTML] Acetate Degradation at Low pH by the Moderately Acidophilic Sulfate Reducer Acididesulfobacillus acetoxydans gen. nov. sp. nov.

I Sánchez-Andrea, CM van der Graaf… - Frontiers in …, 2022 - frontiersin.org
In acid drainage environments, biosulfidogenesis by sulfate-reducing bacteria (SRB)
attenuates the extreme conditions by enabling the precipitation of metals as their sulfides …

Designing a novel mRNA vaccine against SARS-CoV-2: An immunoinformatics approach

I Ahammad, SS Lira - International Journal of Biological Macromolecules, 2020 - Elsevier
SARS-CoV-2 is the deadly virus behind COVID-19, the disease that went on to ravage the
world and caused the biggest pandemic 21st century has witnessed so far. On the face of …

A chromosome‐level assembly of the black tiger shrimp (Penaeus monodon) genome facilitates the identification of growth‐associated genes

T Uengwetwanit, W Pootakham… - Molecular ecology …, 2021 - Wiley Online Library
To salvage marine ecosystems from fishery overexploitation, sustainable and efficient
aquaculture must be emphasized. The knowledge obtained from available genome …

Data enrichment toolchain: A data linking and enrichment platform for heterogeneous data

L Sánchez, J Lanza, JR Santana, P Sotres… - IEEE …, 2023 - ieeexplore.ieee.org
Proliferation of data sources associated to Internet of Things (IoT) deployment as well as
those bound to Open Data Portals (eg European Data Portal, Municipalities Open Data …

[HTML][HTML] Metabolic shift induced by synthetic co-cultivation promotes high yield of chain elongated acids from syngas

M Diender, I Parera Olm, M Gelderloos, JJ Koehorst… - Scientific Reports, 2019 - nature.com
Bio-catalytic processes for sustainable production of chemicals and fuels receive increased
attention within the concept of circular economy. Strategies to improve these production …

[HTML][HTML] Sharing biomedical data: Strengthening ai development in healthcare

T Pereira, J Morgado, F Silva, MM Pelter, VR Dias… - Healthcare, 2021 - mdpi.com
Artificial intelligence (AI)-based solutions have revolutionized our world, using extensive
datasets and computational resources to create automatic tools for complex tasks that, until …

[HTML][HTML] Influence of ultra-processed foods consumption on redox status and inflammatory signaling in young celiac patients

T Nestares, R Martín-Masot, M Flor-Alemany… - Nutrients, 2021 - mdpi.com
The current study was designed to assess the influence of consumption of ultra-processed
(UPF) on oxidative/antioxidant balance and evoked inflammatory signaling in young patients …

[HTML][HTML] A metabolic and physiological design study of Pseudomonas putida KT2440 capable of anaerobic respiration

LFC Kampers, JJ Koehorst, RJA van Heck… - BMC microbiology, 2021 - Springer
Background Pseudomonas putida KT2440 is a metabolically versatile, HV1-certified,
genetically accessible, and thus interesting microbial chassis for biotechnological …

[HTML][HTML] Genome-scale metabolic modeling underscores the potential of Cutaneotrichosporon oleaginosus ATCC 20509 as a cell factory for biofuel production

N Pham, M Reijnders, M Suarez-Diez, B Nijsse… - Biotechnology for …, 2021 - Springer
Background Cutaneotrichosporon oleaginosus ATCC 20509 is a fast-growing oleaginous
basidiomycete yeast that is able to grow in a wide range of low-cost carbon sources …